Gene Acel_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0257 
Symbol 
ID4486328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp276033 
End bp276686 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content70% 
IMG OID639729020 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_872017 
Protein GI117927466 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.300778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATC AGCGGCAAGG CCGCCGTCCC TGGCTCGTCG GTGTGACGGG GGCGAGCGGT 
ACGCCGTATG CCGCTGCGCT GCTGCGCGGC CTGCTCGCGG CGGGCCGGCC GGTCGACCTG
GTGGTCTCGC GGGCCGCGCG GCTCACGCTC CGCGACGAAG CAGGCCTCAC CTGGCGAGAC
GACCTGCCAA GTCTGCGGCG CTGGCTGGAG ACCCCGCTCG ATGACACCCT TCCGTCCCTC
CCGGCCGAGC CGTGGGACGT GCGGATCTGG AAGGTGACCG ATCTCGCGGC GCCGCCGTCC
AGCGGTTCGT ACCTGACCCA CGGCATGGTC GTGATACCGG CCAGTACGGC GTCCATCGCG
GCCATCGCAA CCGGGCTGTC CAGGGATCTG CTGCAACGCG CCGCGGATGT CACCCTCAAA
GAACGGCGTC TGCTGATCGT CGTCCCGCGG GAGACCCCGC TCACCGGAAT CACCCTGCGC
CAGCTGGCGA CTCTGGCGGA TCTGGGGGTG GCGGTCGTAC CGGCGGCGCC CGCTTTTTAC
AGCAAACCGA AGAGCGTGCA GCAGTTGGTC GATTTCATCG CCGGGAAGGT GCTGGACCTG
CTCGGCGTCG AGCACGAGCT CTTCGCGCGG TGGACGGGAC AGCTCGGCGG TTGA
 
Protein sequence
MTDQRQGRRP WLVGVTGASG TPYAAALLRG LLAAGRPVDL VVSRAARLTL RDEAGLTWRD 
DLPSLRRWLE TPLDDTLPSL PAEPWDVRIW KVTDLAAPPS SGSYLTHGMV VIPASTASIA
AIATGLSRDL LQRAADVTLK ERRLLIVVPR ETPLTGITLR QLATLADLGV AVVPAAPAFY
SKPKSVQQLV DFIAGKVLDL LGVEHELFAR WTGQLGG