| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0246 |
|---|
| Symbol | |
|---|
| ID | 4486317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 264536 |
|---|
| End bp | 265714 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639729009 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_872006 |
|---|
| Protein GI | 117927455 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0467298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAG TGGAACACAG CACGGTTCTC ATCTGGTCAC CGGAACTCCT GCGCTACGAC
TTCGGCCCTG GACATCCGCT CGCGCCGGTA CGCGTCGCGC TCACCATTCA GCTCGCCGAA
GCGATTGGCG TCCTGGCGAG CGTGCGGCTC ACGCCGGTTC CGGAGCCCGA TGACACTCTC
GCTGCGGCAA TTCACACCGC GGAGTACATC GCCGCGGTGC GCGCGGAACA GCCGAATCTC
CGGTACGGAC TGGGAACCGG CGACGTACCG GTATTTCCCG GCATGCATGA TGCCGCGACC
CGGATCGTCA CCGCCTCGGT CGAAGCGGCC CGGGCAGTCT GGACCGGCGG TTACCGGCAC
GCCGTCAACG TCGCTGGCGG GCTGCACCAT GCGATGCCGA ACGCGGCCTC CGGGTTCTGC
GTGTACAACG ATCCCGCCGC GGCGATCCGA TGGCTGCTGG ACCACGGTGC CGAACGGGTG
GCATACGTCG ACATCGACGT TCACCACGGC GACGGCGTTC AGGCGATGTT CTACGACGAC
CCGCGTGTCC TGACGATTTC GCTCCACCAA GACGGCCGCA CGTTGTTCCC CGGAACCGGC
GCGCCGACGG AATCCGGCGG GCCGCACGCC CGCGGCCACG CCGTCAATGT CGCCCTTCCC
CCGGGCACGG ATGACGCCGG GTGGTTGCGG GCCTTCCATG CGGTCGTCCC ACCGCTGCTG
CGCGCATTCC GCCCGGACGT CCTGGTCAGC CAGCATGGTT GCGACACGCA CCGGCTCGAT
CCGCTCGCCC AGCTCAATCT CACCCTGGAT GGGCAGCGCA CCGCGCACGC CGCAATTCAC
CGGTTGGCGC ACATGTTCGC CAACGGGCGC TGGGTGGCTA CCGGCGGAGG CGGGTACGTC
CTTGCCCGTG TCGTGCCGCG CAGCTGGACG CACCTCATCG CGGAAGCCGC AGGCGCGTCG
ATTCCCCCCG AGACTCCGAC ACCGGAATCC TGGCGGACCG CCGCCCGCGC GGTCGAACCG
TCGCCGCCGC AGACCATGAC GGACGGCGCC GAACCGGCGT GGCGCGAGGT CGCCGACGGT
CTCGACCCGG CGGATCCCGT CGACCGGGCG ATCCTTGCCA CCATGCGGGA GGTGTTTCCG
TACCACGGCC TGTTCGTGCC GAACAACGTG AAAAACTGA
|
|---|
| Protein sequence | MTSVEHSTVL IWSPELLRYD FGPGHPLAPV RVALTIQLAE AIGVLASVRL TPVPEPDDTL
AAAIHTAEYI AAVRAEQPNL RYGLGTGDVP VFPGMHDAAT RIVTASVEAA RAVWTGGYRH
AVNVAGGLHH AMPNAASGFC VYNDPAAAIR WLLDHGAERV AYVDIDVHHG DGVQAMFYDD
PRVLTISLHQ DGRTLFPGTG APTESGGPHA RGHAVNVALP PGTDDAGWLR AFHAVVPPLL
RAFRPDVLVS QHGCDTHRLD PLAQLNLTLD GQRTAHAAIH RLAHMFANGR WVATGGGGYV
LARVVPRSWT HLIAEAAGAS IPPETPTPES WRTAARAVEP SPPQTMTDGA EPAWREVADG
LDPADPVDRA ILATMREVFP YHGLFVPNNV KN
|
|---|
| |