| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0242 |
|---|
| Symbol | |
|---|
| ID | 4485380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 262115 |
|---|
| End bp | 262942 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639729005 |
|---|
| Product | Allergen V5/Tpx-1 family protein |
|---|
| Protein accession | YP_872002 |
|---|
| Protein GI | 117927451 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0111615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTCG CGGCGTTCAC CCGCCGGGCC GGTCTCCGCC TCGGCTCCGG AATCGCATGC
CTGTCGGTGA TTTTCACCGG AATTCTTGCG GCTGCTTCTC CGGCGTGGGC AAGCCCGGCA
TCCGAGCTTG CGGCGGCTAC CAATGCCGCG CGCCTTAGTG CCGGCCTGCC GGCGCTCTCG
GTGGATGCCG GAATGTCGGC GGTGGCCCAG AGTTGGGCCA ATCATCTTGC CGCCACCCAG
GTGCTCGCGC ACAATCCGCA GGTGCAGACG CAGATTTCCA ACTGGGTCGT GCTGGGGGAG
AACGTCGGGA TGGCGATGGA CATCCCCAGC GTGCAACAAG CATTCATGAA AAGTGCGGAG
CACCGCGACA ATATTCTCAA TCCGGCTTTC ACCCAAATGG GTGTCGGTGC GGCGAGCTCG
ACGTATCCCA GTTGCGGCTG CACTGTGCTC TGGGTGGTGG TCGATTTCCG CCGTCCGATG
ACCACCGCCC CGTCATCGCC GGTACCCCCG GCACCGCGGA CAGCGTCGCC GCTCCGGTCG
TCCGCTCCGG TACCCCCGAC CAGAAATCAG CCGCAACCGC AAACACCAGC AGCGACGTCG
TCGTCAGCAC CGGTGCGCGC CGCCGTTCCG GCGTCTGCGG TTTCAACAGG GCCGGCGCCG
GACGCCTCGC CGCACCAGGC TGCGCCGCCG CCTCCCTCGC CGGCCGATTC CCTCGGTACC
GGTCTTGCTG AAATTGCGGC AAGTCCCAGC CCACCGCTCA CGGCGGCACC GGATCCCGTG
AGCCGACTGC TGACATTTGT TTCTCTCGTC ACCCAGCTGT CTGGTTAG
|
|---|
| Protein sequence | MHVAAFTRRA GLRLGSGIAC LSVIFTGILA AASPAWASPA SELAAATNAA RLSAGLPALS
VDAGMSAVAQ SWANHLAATQ VLAHNPQVQT QISNWVVLGE NVGMAMDIPS VQQAFMKSAE
HRDNILNPAF TQMGVGAASS TYPSCGCTVL WVVVDFRRPM TTAPSSPVPP APRTASPLRS
SAPVPPTRNQ PQPQTPAATS SSAPVRAAVP ASAVSTGPAP DASPHQAAPP PPSPADSLGT
GLAEIAASPS PPLTAAPDPV SRLLTFVSLV TQLSG
|
|---|
| |