Gene Acel_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0228 
Symbol 
ID4485366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp246009 
End bp247391 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content70% 
IMG OID639728991 
ProductDNA repair protein RadA 
Protein accessionYP_871988 
Protein GI117927437 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.745621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGAA CGGTGTATCG GTGTGTCGAA TGCGGGTGGA TGACGCCCAA ATGGCTGGGG 
CGCTGCGGTG GTTGCCGATC GTGGGAGACA CTGCAGGCCG AGGAGCCGGG GCGGCAATCG
CGCAGTCACC GGGCACCGCC GGCACGACCC GCGGTGCCGA TTGACGCGGT GGATGCATCC
ACCGCGCGAC CGCTGCCGAC CGGGGTCGGT GAATTCGACC GGGTTCTGGG CGGCGGCCTC
GTTCCGGGCT CGGTTGTGCT GTTCGCCGGG GAGCCGGGCA TCGGCAAATC GACCCTGCTG
CTCGATGCCG CGGCGCGGTT CACCCGCCGG CACGGCACAG CGCTGTATGT GACTGCCGAG
GAATCGGCCG GCCAGGTGCG GGCGCGCGCC GATCGGATCG GTGCGCTGGC ACCGCGGCTC
TATCTCGCGG CGGAGACGTC ACTTGAGGCT GTGGAAGCGC AGGTCGCGGC GGTTCATCCG
GCGTTGCTCA TTGTCGATTC GGTGCAGACG GTCTGTGCGG ACGGCGTGGA CGGCACACCC
GGCGGCGTCT CCCAGGTGCG GGAAGTGGCC GCCGCGATGA TCCGGCTGGC GAAAAGCCAT
CAACTGACCG TCGTCCTGAT CGGGCACGTC ACCAAGGATG GTCTGATCGC CGGTCCCCGG
TTGCTGGAAC ATGCGGTCGA CGTCGTCCTT TCTTTCGAGG GTGACCGTAC CGGCGGGCTC
CGGTTGCTTC GTCCGGCGAA GAACCGGTTC GGGACCTGCG AGGATGTCGG CTGTTTCCGG
CTCACCGCCG GCGGCATCGA GGAAATTCCC GATCCCAGCC TCCTTTTCGT GAGCGGTTCG
CCGTCCGCCG CACCCGGCGT ATGCGCCACG GTCGCGATGG AGGGCACCCG GCCGTTGGTG
ACGGAAATTC AGGCGCTCGT CGCCCCGTCG GCGCAGGCGG TGCCGCGGCG CTCCACCGCC
GGGCTGGACG CCGCTCGGGT GGCGATGACG CTGGCGGTCG TCGAACGGCG GGCGGGCGTC
GTGCTGGCCG GTCAGGACGT CTTCGTCGCG ACGGTGGGCG GGGCTCGGAT TCGGGAACCA
GCCGGTGATC TCGCGTTAGT CCTGGCGGTG GCGAGTGCGG CGGCCGATCG ACCGCTGCCG
CCGGGACTCC TTGCGGTTGG CGAAGTCGGC CTCGCTGGTG AGATTCGGCC CGTGCCGGGA
TGGGGACGCC GGATCACGGA GGCTGGCCGC CTTGGCTTTC GCTGCGTCGT CGCGCCGGTT
GGCGTTGAGG TTCCGCCGGA CGGTCCGCAG GTCATCACGG CTCGTGACGT CCGGGAAGCG
CTCCGGAGTG TTGCCCGGCT GGGCATTCGA TCGGCCGCCG TCGACGCGGC GCTCGCAGGG
TAG
 
Protein sequence
MSRTVYRCVE CGWMTPKWLG RCGGCRSWET LQAEEPGRQS RSHRAPPARP AVPIDAVDAS 
TARPLPTGVG EFDRVLGGGL VPGSVVLFAG EPGIGKSTLL LDAAARFTRR HGTALYVTAE
ESAGQVRARA DRIGALAPRL YLAAETSLEA VEAQVAAVHP ALLIVDSVQT VCADGVDGTP
GGVSQVREVA AAMIRLAKSH QLTVVLIGHV TKDGLIAGPR LLEHAVDVVL SFEGDRTGGL
RLLRPAKNRF GTCEDVGCFR LTAGGIEEIP DPSLLFVSGS PSAAPGVCAT VAMEGTRPLV
TEIQALVAPS AQAVPRRSTA GLDAARVAMT LAVVERRAGV VLAGQDVFVA TVGGARIREP
AGDLALVLAV ASAAADRPLP PGLLAVGEVG LAGEIRPVPG WGRRITEAGR LGFRCVVAPV
GVEVPPDGPQ VITARDVREA LRSVARLGIR SAAVDAALAG