| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0198 |
|---|
| Symbol | |
|---|
| ID | 4485284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 210009 |
|---|
| End bp | 211385 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639728961 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_871958 |
|---|
| Protein GI | 117927407 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.193606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCG AGTTTGTTGG GATGGCTGTT GCGTGTGTGA AAAAGCCGCT ATGGTCGTGC
CGACAGGGAG TGGGAGGTGC GCCGGTGCGG GCTGGCCGAT GGCTCACGAC CGTAGGGCTG
GTGGTCGCGT TCACCGTCGG AGCCACCTGC CCAGCGCTCG CCGACAAGCC GCCCATCATC
CCGAGCCAGT CCGAGGTGGA CGCCGCCCGG GCCGCCGCAC AGGCGAAGGC CGCGGCGGTC
GCCCAGACCG AACAGGCGCT CGCGGATGCG AACGCGCAGC TGCAGAAACT GAACGATCAG
GTTGAGACCC TGGTCGAGGC GTACAACGGT GCGATGGTCC GTCTCCAGGA TGCCCAAGCC
AAGGCTCGGG CCGCCGCCGC GAATCTTGCC GCAGCCCGCG CCGCGCATGA GCAGGCGCAG
ATCGAGATGG ATCAGTTCGC CGCGCTGACC TACATGGGCG CCGGCGACGT CGCCAAACTG
ACCGCGTTGC TCTTCGCGCC TGACCCCGAG CGGTTCTTGA CCAGGGCCGG GACTCTCGCC
GCGATCGATC GGCACCGTCA GGGAATCATC GCGCTCACCG AGGCCACCGC TCAGGCTGAA
GCGAGCGCCG CAGCTGCCGC GGCACAAGCC CTGGGCCAGC AGCAGAAGGC CGCGGACGCC
GCGGCCCGCG CGAAGGACGC CGCGGTCCAG GCGGTGAACG CCCAGGCTGC CGAGGTCGCA
CAGATCACCC AGCGCAAGCA GGACCTGCAG GCTCAACTCG CCGTGTTGCA AGGGAAAGCC
AAGAGTCTCG CCGAAGCACG TGCCCGGGGA CTCGCCGAGC TCGCCGCTCA GCGCGCGGCT
GCTGCGGCCG CCGCAGCTGC AGCAGCAAAA CGACGGGCCG CGGAGCAGGC GGCAAGCGAA
TCGGGGACCG GCTCATCGGC TGGGCCGGTG GGCAATCTGC CGACCCCGGG AATGGGTCAC
TCGATCTCGA CGCCGCAGCA GCGCGCCGGT GCGGTCGCCT TCGCCCGGTC ACAGATCGGC
GTCTGGTACC GATGGGCCGG CGCCGGAGAG GTGGGGCCGA CCGTCACGGA CCAGGGCATT
CAGAACGTGC CCGGATATGA CTGCTCCGGA TTGGTCATGC GGGCGTACGA ATCGGTCGGC
ATCGAGCTCG GCCACTACAC CGGCTTGCAG TGGGACGAGG GGATGCATGT CTCGCAGGAC
CAGCTCATGC CGGGAGATCT GGTCTTCTTT GCCACCAACG TCAACGATCC CAGCACGATT
CATCACGTCG GCATTTACAT CGGCAACGGC CAAATGATTG ATGCTCCGCA GACCGGAGAG
CAGGTCGGCA TCCACAATGC GTTCCGGCCG GATTACATCG GCGCGGTTCG CCCCTAG
|
|---|
| Protein sequence | MTSEFVGMAV ACVKKPLWSC RQGVGGAPVR AGRWLTTVGL VVAFTVGATC PALADKPPII
PSQSEVDAAR AAAQAKAAAV AQTEQALADA NAQLQKLNDQ VETLVEAYNG AMVRLQDAQA
KARAAAANLA AARAAHEQAQ IEMDQFAALT YMGAGDVAKL TALLFAPDPE RFLTRAGTLA
AIDRHRQGII ALTEATAQAE ASAAAAAAQA LGQQQKAADA AARAKDAAVQ AVNAQAAEVA
QITQRKQDLQ AQLAVLQGKA KSLAEARARG LAELAAQRAA AAAAAAAAAK RRAAEQAASE
SGTGSSAGPV GNLPTPGMGH SISTPQQRAG AVAFARSQIG VWYRWAGAGE VGPTVTDQGI
QNVPGYDCSG LVMRAYESVG IELGHYTGLQ WDEGMHVSQD QLMPGDLVFF ATNVNDPSTI
HHVGIYIGNG QMIDAPQTGE QVGIHNAFRP DYIGAVRP
|
|---|
| |