Gene Acel_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0198 
Symbol 
ID4485284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp210009 
End bp211385 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content68% 
IMG OID639728961 
ProductNLP/P60 protein 
Protein accessionYP_871958 
Protein GI117927407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.193606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCG AGTTTGTTGG GATGGCTGTT GCGTGTGTGA AAAAGCCGCT ATGGTCGTGC 
CGACAGGGAG TGGGAGGTGC GCCGGTGCGG GCTGGCCGAT GGCTCACGAC CGTAGGGCTG
GTGGTCGCGT TCACCGTCGG AGCCACCTGC CCAGCGCTCG CCGACAAGCC GCCCATCATC
CCGAGCCAGT CCGAGGTGGA CGCCGCCCGG GCCGCCGCAC AGGCGAAGGC CGCGGCGGTC
GCCCAGACCG AACAGGCGCT CGCGGATGCG AACGCGCAGC TGCAGAAACT GAACGATCAG
GTTGAGACCC TGGTCGAGGC GTACAACGGT GCGATGGTCC GTCTCCAGGA TGCCCAAGCC
AAGGCTCGGG CCGCCGCCGC GAATCTTGCC GCAGCCCGCG CCGCGCATGA GCAGGCGCAG
ATCGAGATGG ATCAGTTCGC CGCGCTGACC TACATGGGCG CCGGCGACGT CGCCAAACTG
ACCGCGTTGC TCTTCGCGCC TGACCCCGAG CGGTTCTTGA CCAGGGCCGG GACTCTCGCC
GCGATCGATC GGCACCGTCA GGGAATCATC GCGCTCACCG AGGCCACCGC TCAGGCTGAA
GCGAGCGCCG CAGCTGCCGC GGCACAAGCC CTGGGCCAGC AGCAGAAGGC CGCGGACGCC
GCGGCCCGCG CGAAGGACGC CGCGGTCCAG GCGGTGAACG CCCAGGCTGC CGAGGTCGCA
CAGATCACCC AGCGCAAGCA GGACCTGCAG GCTCAACTCG CCGTGTTGCA AGGGAAAGCC
AAGAGTCTCG CCGAAGCACG TGCCCGGGGA CTCGCCGAGC TCGCCGCTCA GCGCGCGGCT
GCTGCGGCCG CCGCAGCTGC AGCAGCAAAA CGACGGGCCG CGGAGCAGGC GGCAAGCGAA
TCGGGGACCG GCTCATCGGC TGGGCCGGTG GGCAATCTGC CGACCCCGGG AATGGGTCAC
TCGATCTCGA CGCCGCAGCA GCGCGCCGGT GCGGTCGCCT TCGCCCGGTC ACAGATCGGC
GTCTGGTACC GATGGGCCGG CGCCGGAGAG GTGGGGCCGA CCGTCACGGA CCAGGGCATT
CAGAACGTGC CCGGATATGA CTGCTCCGGA TTGGTCATGC GGGCGTACGA ATCGGTCGGC
ATCGAGCTCG GCCACTACAC CGGCTTGCAG TGGGACGAGG GGATGCATGT CTCGCAGGAC
CAGCTCATGC CGGGAGATCT GGTCTTCTTT GCCACCAACG TCAACGATCC CAGCACGATT
CATCACGTCG GCATTTACAT CGGCAACGGC CAAATGATTG ATGCTCCGCA GACCGGAGAG
CAGGTCGGCA TCCACAATGC GTTCCGGCCG GATTACATCG GCGCGGTTCG CCCCTAG
 
Protein sequence
MTSEFVGMAV ACVKKPLWSC RQGVGGAPVR AGRWLTTVGL VVAFTVGATC PALADKPPII 
PSQSEVDAAR AAAQAKAAAV AQTEQALADA NAQLQKLNDQ VETLVEAYNG AMVRLQDAQA
KARAAAANLA AARAAHEQAQ IEMDQFAALT YMGAGDVAKL TALLFAPDPE RFLTRAGTLA
AIDRHRQGII ALTEATAQAE ASAAAAAAQA LGQQQKAADA AARAKDAAVQ AVNAQAAEVA
QITQRKQDLQ AQLAVLQGKA KSLAEARARG LAELAAQRAA AAAAAAAAAK RRAAEQAASE
SGTGSSAGPV GNLPTPGMGH SISTPQQRAG AVAFARSQIG VWYRWAGAGE VGPTVTDQGI
QNVPGYDCSG LVMRAYESVG IELGHYTGLQ WDEGMHVSQD QLMPGDLVFF ATNVNDPSTI
HHVGIYIGNG QMIDAPQTGE QVGIHNAFRP DYIGAVRP