Gene Acel_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0194 
Symbol 
ID4485280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp206252 
End bp207448 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID639728957 
Productputative signal transduction histidine kinase 
Protein accessionYP_871954 
Protein GI117927403 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.141704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC CCGAGAGCTC CGGAGTCGGG GGGTCCCGGC TGCGCGCGCG TTGCACTCCC 
AGCGCCGGTA CGCGGTGGCG GCGCGCCGGC GGCATCTGGC TCTTCTACCT TCTCGGCCCG
CTCATCGCAG CGTGGCGCAG CTCAAGCCCG GTGGTCGCGG TCGTCGGGTC GTTCCTTCTG
CTGGCGTTCT CCGTCGTCTA CCTCTTTGGC TTCCCGCGTG TCTGGCCCGC TGCCCGGCGT
CGCCGTGACG TTGTGCTCGT GAGCGGGACG CTGGTCATCC TCTCGGCCGC GTCCATCGCA
CTCATCGGCC CGTCCGCTCT GGCGACCTGG GTCTTTGTCG CGGTGACCTG GGTGGTTCTG
CTGCGTTGGC AGATTGCCGT TCCTCTCGTA CTCGCGCTTG CCGCCGCGGC GCTGGCCGTC
CCGCAGCACG TGCCCGGTTG GCATTTGCGC GGACCTCAGT GGTCGCTCGC GGCGAGCATT
GCCTTCGCCA GTTTCGCCGT CCTTGCCGTC GTGCGGGCCA ATCAGAGCCT TGCCGCGGCG
CGGGCCGAAG TCGCTCAACT GGCTGCGGAA CGGGAACGGT TGCGGATCGC CCGCGATTTG
CACGATCTCC TCGGCCACTC GCTGACGACG ATCACTGTGA AGGCCGCACT CGCGGCGCGT
CTGGCGGATC GTGACCTCAC CCGGGCGCGC AACGAGATCG CTGATGTGGA GGCGTTGGCC
CGCCGGACGC TCGCGGATGT GCGGGCTGCC GTCGCCGGCT ATCGCGACGT TCGCTTGGCG
ACCGAAATCG CTACCGCACG GGAAGTCCTC GCCGCCGCCG GGATCGAAGC GGATCTGCCT
CGGGTGGTGG ACGACGTCCC CGCCGAGCTT GCCGGGCTCT TTGGGTGGGT GGTTCGCGAA
GGGGTGACGA ACGTCGTCCG GCATTCGCAG GCCAAGCGGG TACGGATCAC CGTCGACCAG
CGCGTCATCG AGGTGGTCGA CGACGGTGTT GGCGTGCTGT CAGCCGTCGC GGACGCCGCG
CTGGCGGCGT CCGGCAGTGG CGGGGGAGGA GGTCACGGCC TGCTGGGATT GGCCGAACGG
GTGGCTGCCG CCGGGGGCCG GCTCATCACC GGTCCAGCCG ACGGGTTCGG CGCTCCGGGG
TTCCGACTGC GGGTCGAGGT GCCTGCCTTG GCCCTGACGT CAGGGGAGGC GTCGTGA
 
Protein sequence
MTVPESSGVG GSRLRARCTP SAGTRWRRAG GIWLFYLLGP LIAAWRSSSP VVAVVGSFLL 
LAFSVVYLFG FPRVWPAARR RRDVVLVSGT LVILSAASIA LIGPSALATW VFVAVTWVVL
LRWQIAVPLV LALAAAALAV PQHVPGWHLR GPQWSLAASI AFASFAVLAV VRANQSLAAA
RAEVAQLAAE RERLRIARDL HDLLGHSLTT ITVKAALAAR LADRDLTRAR NEIADVEALA
RRTLADVRAA VAGYRDVRLA TEIATAREVL AAAGIEADLP RVVDDVPAEL AGLFGWVVRE
GVTNVVRHSQ AKRVRITVDQ RVIEVVDDGV GVLSAVADAA LAASGSGGGG GHGLLGLAER
VAAAGGRLIT GPADGFGAPG FRLRVEVPAL ALTSGEAS