Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0182 |
Symbol | |
ID | 4485495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 194121 |
End bp | 195044 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639728946 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_871943 |
Protein GI | 117927392 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.677409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0900351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGACG GCGCATATCC AACGTTGCAG CGGATGCTGT TCTCCGTCGC CTACCGGATG CTCGGCAGTG TCGCCGAGGC GGAGGACATC GTACAAGAGG CGTTCGTGCG CTTTTACGCC CTCGACGCCG ATCGTGTGCG CGACATTGAA TCCGTGCCCG CGTATCTGAC GGCTGTGGTC ACCCGCCTGT CGATCGACTA TTTGCGCTCG GCCCGGGCGC GGCGGGAACA GTACGTTGGG ACGTGGTTGC CGGAACCACT CGTCACCGAA CACTCCGTCG TGGACGGTGC GCGTTACGTC GAACAACTTG ACTCGCTCTC CATTGCATTC CTTGTCGTCC TCGAGCGATT GAGTCCACTG GAGCGTGCTG TTTTCCTGCT CCACGATATC TTTGACTACT CGTATCCAGA AATCTCCCGC ATGATAGGGA AGAGCGCGAC GTATTGTCGC CAACTTGCGG TCCGAGCGCG CCGGCATGTC CAGGCGTCGG GCCGAAGACG AACCAAGATA TCCCAGAATG AGCAGGAACG GTTGGCTCGT CGATTCTTCG CCGCTGTTGG TGACGGCGAT GTCGCGGCGC TGGTCGACCT CCTCGTGATG GACGCCGCTG CGTACGGCGA CGGTGGTGGA CAGGCACCCG CCGCTCGGAT ACCCATTTGC GGGCGGGATC GGGTCGCCGC TTTTCTCGCA TCCCTTGGCC GAACAGCTCG CCGATTGGGT GTCCGGTATC GCGTTACGGA AATCAATAGG CAACCCGGCG CGTTGTTCTT CAATCGCTCC GGTCAGTTGC TGAGCGTCGC CATTCTCGAC ATCGGAGAAA ACGGTGTAGG CGCGGTGTAC TCGATCGTCA ATCCTGACAA GCTCCAGCAC TTAGGCCCGG TTGGTGACGT ACGGGAGTTG CTGCGCAAGG GGGTTCCGTC ATAG
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Protein sequence | MADGAYPTLQ RMLFSVAYRM LGSVAEAEDI VQEAFVRFYA LDADRVRDIE SVPAYLTAVV TRLSIDYLRS ARARREQYVG TWLPEPLVTE HSVVDGARYV EQLDSLSIAF LVVLERLSPL ERAVFLLHDI FDYSYPEISR MIGKSATYCR QLAVRARRHV QASGRRRTKI SQNEQERLAR RFFAAVGDGD VAALVDLLVM DAAAYGDGGG QAPAARIPIC GRDRVAAFLA SLGRTARRLG VRYRVTEINR QPGALFFNRS GQLLSVAILD IGENGVGAVY SIVNPDKLQH LGPVGDVREL LRKGVPS
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