Gene Acel_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0181 
Symbol 
ID4485494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp193067 
End bp194065 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID639728945 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_871942 
Protein GI117927391 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.725559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.150951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCC CACACAACCC CACCACCACC CCACACCACA CACACGAGCG TCTACCATCG 
AGACTCGTGT CGGTGACCGT CCAAGCCTCG GCGAAAATCA ACCTGTATTT GCGGGTCGGC
CCGTTGCGGT CCGACGGTTA CCACGATCTT GCGACCGTAT TTCACGCCGT ATCGCTCCAC
GATGAGATTA CCGTCGAGGA GAGCGAGCAT CTCTCTCTTG AAATCTGCGG AGAGCAGGCG
GAGAAAGTCC CGCTTGACGG CGACAATCTC GCCGTCCGTG CGGCAATGCT GCTTGCCAGG
CGGCTCGGGC GGGAACCCGG AGTCCGGATT GTCCTCCGTA AGGGAATTCC GGTTGCGGGT
GGAATGGCCG GCGGCTCTGC TGATGCTGCA GCGACGCTCA TCGCATGCGC GGCGCTGTGG
CATGCGGAAC TTCCGCATGA CGAGCTGATG ACGTTGGCCG CGCAACTCGG GAGCGACGTA
CCGTTCTGCG TTGTCGGCGG TACCGCGTTG GGCCACGGGC GGGGTGAACG TCTGGCACCG
GTGCTCGCGG CCGGACCGTG GTACTGGGTT CTTGCGTTGG CCGATGGCGG ATTGTCAACG
CCACAGGTGT ACGCCGAATT CGACCGCCGC CGCGCATCCG GGGACGGTGA GCTACGCGAG
CCCGGGGACG GCGAGCCGCT CGACGTACCG GCTGCCCTCC TCTCCGCCCT CCGGGACGGC
GATCCCAAAC GGCTCGGCTC GCTGCTGCAC AACGATTTGC AGGACGCCGC TGTCGCCCTG
CGGCCCGCGC TTGGCCGAGT GCTCGAAGCG GGGCTGGACG GCGGAGCCCT CGGAGGCATC
GTCTGCGGTT CCGGCCCCAC CTGCGCTTTT CTGGTGTCCG ACCAGGACGC AGCTGTGGAC
CTCGCGGCAC GATTGGCCGG CTCGGGATGG GTGCGCGCCG TGCGCTGCGC AACCGGACCG
GCCGCGGGCG CGCGCATTCT CGCCAGGACC GCGGGATAA
 
Protein sequence
MTAPHNPTTT PHHTHERLPS RLVSVTVQAS AKINLYLRVG PLRSDGYHDL ATVFHAVSLH 
DEITVEESEH LSLEICGEQA EKVPLDGDNL AVRAAMLLAR RLGREPGVRI VLRKGIPVAG
GMAGGSADAA ATLIACAALW HAELPHDELM TLAAQLGSDV PFCVVGGTAL GHGRGERLAP
VLAAGPWYWV LALADGGLST PQVYAEFDRR RASGDGELRE PGDGEPLDVP AALLSALRDG
DPKRLGSLLH NDLQDAAVAL RPALGRVLEA GLDGGALGGI VCGSGPTCAF LVSDQDAAVD
LAARLAGSGW VRAVRCATGP AAGARILART AG