Gene Acel_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0179 
Symbol 
ID4485492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp188340 
End bp190310 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content63% 
IMG OID639728943 
ProductPHB depolymerase family esterase 
Protein accessionYP_871940 
Protein GI117927389 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.18087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.428012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGTA TTGGACGACG CCTGGCGGTT TGGCTAAGTG CCGGGACTGT TGCGATCACG 
GCGGCCATGA CGGGATTCCT TGGGGCCGGT GGTGCACGCG CCGCCTCGAC AGGCCCGATC
CCACCCGGCG TGTTGACGCA AGTAACGAAT TTCGGCACGA ATCCCACGGC CTTGAACATG
TACGTCTATG TACCGCAAAA TCTGGCTGCC CGGCCTGCTC TGCTGGTCGC CATTCATTAC
TGCACGGGCA GTGCGCAGGC ACTGTTCAGC GGCTACGCGC ACGACTTTGT GACCGCAGCT
GACCGGTACG GATACATCAT TGTCTTCCCG GAGGCCACCC GTAGTGGTCA GTGCTTCGAT
GTCTATAGTC CGCAAGCACT TGCCCGCAAC GGCGGCAGTG ACCCGCAAGG CGTCATGTCC
ATGGTGTCGT GGGTCGAGAG TCAATATCCC ATTGACCGCA GTCGCGTCTT CGCCATGGGC
GTATCGTCCG GCGCCATGAT GACGAACGTA CTGCTCGCCG AATATCCCGA TGTTTTCGCG
GCCGGTGTCG CCTTCATGGG TGTCCCGTAC GGATGCTTCG CGACGGGCAG CGCAAGTGTG
ACGTGGAACA GTCAATGTGC CAACGGCCAG GTGATTAAGA CGGCCCAACA GTGGGGCGAC
CTTGCCCGGT CGGCTTATCC AGGTTACACC GGCGGGTACC CGCGCATTCA ACTCTGGCAC
GGCACGGCGG ATACCACGCT CAACTACGCA AATCTCGGCG AAGAGGTCAA GCAGTGGACC
AACCTGCACG GACTCTCGAC AACGCCGACT TCGAGCGACA GTCCGGTGTC CGGATGGACA
CGAAGCCGGT ACGGCAGCAC GACGACGCAG CCACCGGTCG AAGCGATAAG TGTGGCGGGT
GCGGGTCATG TCCTGCCGCA AACCGGAATG GACGCGTACG CCATCACATT CCTCGGTCTT
GACAGTGCGG GTGGGTCGGT GTCGCCGTCT CCGTCGCCGT CGCCGAGTCC GTCGCCGTCG
CCGAGTCCGT CGCCGAGTCC GTCGCCGAGC CCATCCCCGT CGCCGAGCCC GTCTCCGTCG
CCGTCTTCGT CGCCGGTGTC GGGTGGGGTG AAGGTGCAGT ATAAGAACAA TGATTCGGCG
CCGGGTGATA ATCAGATCAA ACCGGGTTTG CAGGTGGTGA ATACCGGGTC GTCGTCGGTG
GATTTGTCGA CGGTGACGGT GCGGTACTGG TTCACCCGGG ATGGTGGGTC GTCGACACTG
GTGTACAACT GTGACTGGGC CGTGATGGGG TGTGGGAATA TCCGCGCCTC GTTCGGTTCG
GTGAACCCGG CGACGCCGAC GGCGGACACC TACTTGCAGT TGTCGTTCAC CGGCGGCACC
TTGCCGGCTG GTGGGTCGAC GGGTGAGATT CAAAGCCGGG TGAATAAGAG TGACTGGTCG
AATTTCACCG AGACGAATGA CTACTCGTAT GGGACGAACA CCACCTTCCA GGATTGGTCG
AAGGTGACGG TGTACGTCAA TGGCCGGTTG GTGTGGGGGA CTGAACCGTC CGGCACCAGC
CCCAGCCCGA CACCGTCCCC GAGCCCGACA CCGTCCCCGT CCCCGAGCCC GAGCCCGTCG
CCGTCTCCGA GTCCGTCGCC GAGTCCGTCG CCGAGTCCGA GCAGCTCGCC GTCGTCTGGG
TGTGTGGCGA GTATGCGGGT GGACAGTAGT TGGCCGGGCG GGTTTACCGC CACGGTGACG
GTGAGTAATA CCGGTGGGGT GTCGACCAGT GGTTGGCAGG TCGGGTGGAG TTGGCCGTCG
GGTGACAGTC TGGTCAACGC GTGGAATGCG GTGGTGTCGG TGACCGGGAC GTCGGTGCGG
GCGGTCAATG CCTCCTACAA CGGGGTGATT CCCGCGGGTG GGTCGACGAC GTTCGGGTTC
CAGGCCAACG GCACACCCGG CACCCCGACC TTTACCTGCA CCACCTCCTG A
 
Protein sequence
MRRIGRRLAV WLSAGTVAIT AAMTGFLGAG GARAASTGPI PPGVLTQVTN FGTNPTALNM 
YVYVPQNLAA RPALLVAIHY CTGSAQALFS GYAHDFVTAA DRYGYIIVFP EATRSGQCFD
VYSPQALARN GGSDPQGVMS MVSWVESQYP IDRSRVFAMG VSSGAMMTNV LLAEYPDVFA
AGVAFMGVPY GCFATGSASV TWNSQCANGQ VIKTAQQWGD LARSAYPGYT GGYPRIQLWH
GTADTTLNYA NLGEEVKQWT NLHGLSTTPT SSDSPVSGWT RSRYGSTTTQ PPVEAISVAG
AGHVLPQTGM DAYAITFLGL DSAGGSVSPS PSPSPSPSPS PSPSPSPSPS PSPSPSPSPS
PSSSPVSGGV KVQYKNNDSA PGDNQIKPGL QVVNTGSSSV DLSTVTVRYW FTRDGGSSTL
VYNCDWAVMG CGNIRASFGS VNPATPTADT YLQLSFTGGT LPAGGSTGEI QSRVNKSDWS
NFTETNDYSY GTNTTFQDWS KVTVYVNGRL VWGTEPSGTS PSPTPSPSPT PSPSPSPSPS
PSPSPSPSPS PSPSSSPSSG CVASMRVDSS WPGGFTATVT VSNTGGVSTS GWQVGWSWPS
GDSLVNAWNA VVSVTGTSVR AVNASYNGVI PAGGSTTFGF QANGTPGTPT FTCTTS