Gene Acel_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0178 
SymbolksgA 
ID4485491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp187183 
End bp188055 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID639728942 
Productdimethyladenosine transferase 
Protein accessionYP_871939 
Protein GI117927388 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.279271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGACG CTGGTCATGT CGACGCGGTG TGCAAGCCGC TCGGCGCTGC GGACATTCGG 
GAGCTCGCGC GGAGTGCCGG AGTCCGGCCG CGCAAGACAT TCGGCCAGCA TTTTGTTGTC
GATCCCGGAG TGCTGCGGAA AATCGCGCGA TATGCCGAAT TGTCGTCCGA GGACATCGCG
CTTGAGATCG GCCCTGGTTT CGGTTCCCTC ACCCTGGTGC TGTTGCCGCT GGTCCGTCGC
CTGCTTGCCG TCGAGATTGA CCGAGTGCTG GCCGCCGTCC TGCCGGAGAC GATTCGTCGT
CGCTGTCCGG CGTTCGCCGA CCGGCTCGTG GTCGTCCACG GTGACGTTCT GCGGCTGACA
ACTCTCCCGG ACGATCCAAC GGTTCTTGTC GCCAACTTGC CCTACAACGT GGCGGTACCC
GCCGTGCTGC GGGTATTCGA GCGATTTTCC ACCGTGACGC GGACGGTCAT CATGGTGCAA
CGGGAGGTGG CCGAGCGGCT CTGCGCGGAT CCCGGTTCAC CTGCGTACGG TGCGCCCTCG
ATAAAACTGC GGTGGTACGG TCGGGCGAGG ATCGTCGGCT CGGTCTCCGC CGACGTCTTC
TGGCCGCGGC CGCAGGTGGA ATCCGCCGTG GTGCGGATCG ATCGGCAGCC GCCGCCCGTT
CCCGGGGTCG ACCGCGCGGC GGTCTTTGCC GTCATTGACG CCGCATTTGC CCAGCGGCGG
AAGATGTTGC GGCGCGCGCT GAGCGGCTGG GCCGGTTCGG CACAGGCGGC CGAGGAGCGG
ATCCTTGCCG CCGGCCTTCG GCCGACCGAC CGGGGCGAGG CATTGACTCT CGCTGACTTT
ATTCGACTGG CACAGGCACC GCCGACTCGA TAG
 
Protein sequence
MSDAGHVDAV CKPLGAADIR ELARSAGVRP RKTFGQHFVV DPGVLRKIAR YAELSSEDIA 
LEIGPGFGSL TLVLLPLVRR LLAVEIDRVL AAVLPETIRR RCPAFADRLV VVHGDVLRLT
TLPDDPTVLV ANLPYNVAVP AVLRVFERFS TVTRTVIMVQ REVAERLCAD PGSPAYGAPS
IKLRWYGRAR IVGSVSADVF WPRPQVESAV VRIDRQPPPV PGVDRAAVFA VIDAAFAQRR
KMLRRALSGW AGSAQAAEER ILAAGLRPTD RGEALTLADF IRLAQAPPTR