Gene Acel_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0172 
Symbol 
ID4485346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp179336 
End bp180922 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content64% 
IMG OID639728936 
Productglycosyl transferase family protein 
Protein accessionYP_871933 
Protein GI117927382 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.24648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.692182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTGA CGCTCTCCCC GCCGGCCCCG CTCGTAGCAT CGCGCACCCA GGCACGGGTA 
ATCCGCGACC GCCTGGCCCC CGCGTTCGCC GGCAACCCGG TCGTCGGCTG GGTTGGGCCG
TTGCTCATCA CCGCATTCGC CGGATATCTC CGGTTCCACA ATCTGAGCTA TCCGAGCTCC
AAGATTTTCG ACGAGGTGTA CTACGCGCAC GACGCGCACA GCCTCCTCAC CCACGGTGTC
GAGCTCAATA ACACCGACAA CGGGCCGGGC TATGTCGTCC ATCCGCCGCT CGGCAAATGG
ATGATCGCAT TTGGTGAGTG GATTTTCGGC GACAACAGTC TCGGCTGGCG GTTCAGTGCC
GCGGTTGTCG GGACGCTCGC CGTCCTCATC GTCGCCCGCA CCGCCCGACG GATGACCCGC
TCGACCCTGC TGGGGTGCGT CGCCGGGCTG CTGTTCAGCC TCGACGGCCT GGAATTCGTA
CAGAGCCGGA CGTCGATGCT GGACATCTTT CTGATGTTCT GGATCGTGGC GGCTTTTGCC
TGTCTCATCC TCGACCGCGA CCAGGTCCGG GCCCGGCTGG CTGCATGGTC GGCCGCTCGG
ATCCGGGCGG CGGACACCAC CGGCGGCGGC GCGTCATCGG CCGAACAGCC GCACATCGGC
GTCCGCTGGT GGTTCATCGC CACGATGTTC TGCCTCGGAG CCGCCTGCGC GACCAAGTGG
GACGGCGTCT ACTTGCTCCC GGCATTCGGC GTTCTCGCCT CCGTCTGGAC GATGGGCGCA
CGGCGGGCAG CCGGCCTGCC CCGTCCGGCG CTCACGACGG CGGTTCGGGA CGTTCCCGGG
CTTTTTGCGA CAACGATTCT CGTTCCGCTC GCCACGTACC TCATCTCGTG GACCGGCTGG
TTCGTCAACA CCGGGAAATA CGCCTGGGAC CGTGATTGGG CGAACAATCG CCCGGGCTGG
GCGTGGGTGC CGGCGTGGAT TCGCAATCCG ATCCGCGGCT TGTGGCATTA TCACGCGGAA
GCGTTGAATT TCCACCTGCA CCTGGATTCG TACCACAGCT ACCGGTCGAA TGCCTGGACG
TGGCTCTTCG AAACCCGACC GGTGCTCTAC TACGCGGAGT ACCCGAAAGC CCCCAATCAG
GGATGCCACG CGGCCGCCGG CTGCGCCCAA ATGATCTACG ACATGGGGAC GCCGGCCATC
TGGTGGGCGT CCATTCCGGT GATGCTTTTC ATGGCGTATT TAGTACTGCG CCGGGACTGG
CGCGGCAGCG CGCTGCTGGT TCCCTTCGTC TGCCTGTACG TTCCGTGGCT CTTCACCTTC
CACCGAACGA TGTTCTACTT CTACGCCCTG CCTCTGCTCC CCTTCATCTG CATCGCTCTC
GCGGTCGCCA TTGGTTACGT TCTCGGCCCG GCCGATGCGA CACCGGCCCG CCGCCTGGTC
GGCGCGACGG TCGCCGGTTC GTACGTCCTC ATCGTGGTGC TTCTCTTCTT CTATTTCCTG
CCGATCCTGA CCGGGAAGAC AATTCCGTTC GTCGAATGGC AGCACAAAAT GTGGTTCAAC
AGCTGGAGCG AAAGCAATGG CTCGTAA
 
Protein sequence
MPVTLSPPAP LVASRTQARV IRDRLAPAFA GNPVVGWVGP LLITAFAGYL RFHNLSYPSS 
KIFDEVYYAH DAHSLLTHGV ELNNTDNGPG YVVHPPLGKW MIAFGEWIFG DNSLGWRFSA
AVVGTLAVLI VARTARRMTR STLLGCVAGL LFSLDGLEFV QSRTSMLDIF LMFWIVAAFA
CLILDRDQVR ARLAAWSAAR IRAADTTGGG ASSAEQPHIG VRWWFIATMF CLGAACATKW
DGVYLLPAFG VLASVWTMGA RRAAGLPRPA LTTAVRDVPG LFATTILVPL ATYLISWTGW
FVNTGKYAWD RDWANNRPGW AWVPAWIRNP IRGLWHYHAE ALNFHLHLDS YHSYRSNAWT
WLFETRPVLY YAEYPKAPNQ GCHAAAGCAQ MIYDMGTPAI WWASIPVMLF MAYLVLRRDW
RGSALLVPFV CLYVPWLFTF HRTMFYFYAL PLLPFICIAL AVAIGYVLGP ADATPARRLV
GATVAGSYVL IVVLLFFYFL PILTGKTIPF VEWQHKMWFN SWSESNGS