Gene Acel_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0141 
Symbol 
ID4485578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp146984 
End bp147709 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content70% 
IMG OID639728903 
Productpeptidase C60, sortase A and B 
Protein accessionYP_871902 
Protein GI117927351 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGGCA ACTCATCCAG CTCCCAGCGC AGCCACCGGT GGTGGTTGCG CTGGGAGATT 
CTTGCCGCCG CTGCCGGCCT TGTTCTGCTC GCCGGTTCCG GGTGGGCGGC AACGCAATCC
GGCTACATCA CGCCGCGTCC GGCGGGTATC GTCCCCGGCG GACCGCCGTC CGGGAACCAG
CCACCGTGGG CCGCCGGGAC ACCAAACCCT GCCACTGCCG GCAGCGCGTC AGGCCTCGGA
TACAGCACGC CCACGGCCAC CCCCACGCCC GCCACGGCCC CGCGACCGCA CGTCCTTCGG
CTCGAAATCC CGGCACTGAA GGTCAGCGCC CCGGTCCAGC CCGTCGGCAT ACTTCCCGAC
GGAACACTCG GCGTACCGGC GGATCCTCGC GTCGTCGGTT GGTGGCGCCA GGGTGCTGCC
CCGGGGGAGG AAGGCACGGT CGTCCTCGAT GGCCACGTCG ACACCGCCGA AGCGGGACCC
GGCGCGCTCT TCTACCTGGA CCGGCTTCCC ATGGGGTCGG CCGTCCTTGT GCAAACGGAC
CGCGGCACGT TCACGTATCG CGTTGTCGGA CGCCGCGTCT ACCGAAAGAC CGCCCTTCCC
GCCTCGGTTT TCGACCAGGC GACAACTCCG CGGCTCGTGC TCGTCACGTG CGGCGGACCC
TTCGACCGGA AGACCGGCCA CTACGTCGAC AACGTCGTCG TCTACGCCGT CCCCGCGGAG
AGGTGA
 
Protein sequence
MGGNSSSSQR SHRWWLRWEI LAAAAGLVLL AGSGWAATQS GYITPRPAGI VPGGPPSGNQ 
PPWAAGTPNP ATAGSASGLG YSTPTATPTP ATAPRPHVLR LEIPALKVSA PVQPVGILPD
GTLGVPADPR VVGWWRQGAA PGEEGTVVLD GHVDTAEAGP GALFYLDRLP MGSAVLVQTD
RGTFTYRVVG RRVYRKTALP ASVFDQATTP RLVLVTCGGP FDRKTGHYVD NVVVYAVPAE
R