Gene Acel_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0132 
Symbol 
ID4484620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp135096 
End bp135881 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content58% 
IMG OID639728894 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_871893 
Protein GI117927342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.290821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACCA TCGTGACGGT GATTTCGGTC TTTCCGCTGT ACTACACGAT GGTGATCGGC 
TCGCACACCA ATGCCGAGAT GGCGCAAACC CCGCCGCCGT TCACCGTCAA TACCTCGCTC
TTCGACAACA TGCGTGGAGC GCTCAAGCAG CAGCCGCTCT TCCGCGACAT CTTCAACTCC
ATCATCGTGT CCGGATTCAT CACCCTCGGA ACAGTCGCTT TCTGTACCCT GAGCGGTTTC
GCCTTTGCGA AACTCCGTTT TCGCGGCAAC AAGCTCTTGT TCGCACTGAC CATCGGGACG
ACGCTTATTC CCCCGCAGCT CGGCGTCATT CCGCTCTACA TCTACATGTC CAAGTTTCAC
CTCACCCACC ACTTGGCTGC TGTAATCTTG CCGAACCTGG TCAGCGCATT CGGCGTGTTC
TTCATGCGCC AGTACCTTGT GACGGCGATG CCGACGGAGC TGCTTGAAGC AGGGTGGGTG
GACGGAGCGT CGACATTTCG CATTTTCCGC TCCGTCGTTG TGCCGATCGC GCGTCCTGCC
ATGGCGGTTC TCGGAATGAT CACATTTCTC TTTGCCTGGA ACGACTTCTT CTGGCCGATG
ATCGCGCTGA CCACGCGGAA TGCAACCGTT CAGGTCGGTT TGGCGGGTCT GGGTCAGGGT
TACGTACCGC AGCAGGCGAT CATCATGGCA GGCACCATGC TCTGCACCTT CCCGCTGCTC
ATCGTTTTCG TGTTACTCGG CAGGCAGATT GTTGGAGGCA TCATGCAAGG AGCGGTCAAG
GGATGA
 
Protein sequence
MLTIVTVISV FPLYYTMVIG SHTNAEMAQT PPPFTVNTSL FDNMRGALKQ QPLFRDIFNS 
IIVSGFITLG TVAFCTLSGF AFAKLRFRGN KLLFALTIGT TLIPPQLGVI PLYIYMSKFH
LTHHLAAVIL PNLVSAFGVF FMRQYLVTAM PTELLEAGWV DGASTFRIFR SVVVPIARPA
MAVLGMITFL FAWNDFFWPM IALTTRNATV QVGLAGLGQG YVPQQAIIMA GTMLCTFPLL
IVFVLLGRQI VGGIMQGAVK G