Gene Acel_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0129 
Symbol 
ID4484617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp130609 
End bp132018 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content64% 
IMG OID639728891 
Productcarbohydrate-binding family 6 protein 
Protein accessionYP_871890 
Protein GI117927339 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.235369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCA AGACCTTCGC AAAGCGGGAG AAACGGGGGA AGTCGCGGCG ATCCTTGTGG 
TCGCTCGGGC GGACACTGAT CGCAGCGCTG CCGGCGGCGG CGCTTCTCCT GCCGGTATCC
AAGCCGGCGC AAGCAGCTGT ACCGTCGCCG CCATCGGGGT GGACGACGGT CTTCAGCGAC
GACTTCACCG GACCGGCAGG CAGCGGGGTC AACACCGCGA ACTGGCTGTA TGACACCGGA
ACCGGGTATC CGGGCGGCGC ACCGAATTGG GGAACCGGTG AAGTCGAGAC GATGACCAAC
TCAACCGCCA ACGTCTACCA GGACGGCAAT GGCCATCTGG TGATCAAGCC GATTCGCAAC
GCCAACGGCA GCTGGACCTC CGGACGGATC GAGACGCAAC GGACAGACTT CGCTGCGCCA
CCCGGCGGCC AACTGGAGAT CATCGCGTCG TTGCAACAAC CAAACCCGGC GAGCGGACTC
GGGTACTGGC CCGCCTTCTG GGCCCTCGGT GCAGCCGCCC GTCCCGTTGG CGCGACGAAC
TGGCCGAGCA TCGGCGAGCT GGACATCATG GAGGACGTCA ATGCCCGATC GCAGGTCGCA
CAGACCCTGC ACTGCGGGGT CAATCCGGGC GGACCGTGCA ACGAGACATC GGGTTTGGGG
AGCGGGCTCG TCGCGTGCAG CGGCTGTCAG ACCGGCTATC ACACGTACGC GGTGATTGTC
GACCGACGGA ACACAAGCGC CGAGCAGTTG CGGTTTTACG TCGACGGAAA TCTGAATTAC
ACCATCAACG AAAGTCAGAT GGACCCAACG ACCTGGCAGA ATGCGATCGA CCACGGCTTC
TTCCTCATCT TTGACGTCGC GATGGGCGGC GGTTTCCCCA ACGGTGTCTG CGGATGCACG
ACCCCGACGG CCGCAACCAC ATCGGGCGCG GGCATGAGCA TCGACTGGGT TGCGGTGTAC
CAGACCGGCG GTGGTGGTGG CGGCGGTGGT GGCGGCACGG TGTCCGCGAC GTCGACCATC
CAGGCGGAGA ATTACGCGGC CCAATCGGGT ACGCAGACCG AACCCTGCTC GGACACCGGC
GGCGGCCTGG ACGTCGGCTG GATCGGCAAC GGCGACTGGC TGCAGTACAA CAATGTCGAC
TTCGGTTCCA CGCCGCTCAC TCAATTCAAG GCCCGCGTCG CATCGGGGTC CGCCGCTGGA
GTGAGCGGTC TCGTCGAAGT CCATCTCGAC AGTCTGAACA ACCCCGCTAT CGGCAGTTTT
GCCATCGCCA ATACCGGAGG CTGGCAGAGT TGGCGGACCG TACCGGCAAA CATCAGTGGA
ACGACCGGTG TGCATACCGT CTTCCTCAAG TTCGTCACCG GCTCCGGCCA GGACTTCGTC
AACGTGAACT GGTTCACCTT CGCGCCTTGA
 
Protein sequence
MHRKTFAKRE KRGKSRRSLW SLGRTLIAAL PAAALLLPVS KPAQAAVPSP PSGWTTVFSD 
DFTGPAGSGV NTANWLYDTG TGYPGGAPNW GTGEVETMTN STANVYQDGN GHLVIKPIRN
ANGSWTSGRI ETQRTDFAAP PGGQLEIIAS LQQPNPASGL GYWPAFWALG AAARPVGATN
WPSIGELDIM EDVNARSQVA QTLHCGVNPG GPCNETSGLG SGLVACSGCQ TGYHTYAVIV
DRRNTSAEQL RFYVDGNLNY TINESQMDPT TWQNAIDHGF FLIFDVAMGG GFPNGVCGCT
TPTAATTSGA GMSIDWVAVY QTGGGGGGGG GGTVSATSTI QAENYAAQSG TQTEPCSDTG
GGLDVGWIGN GDWLQYNNVD FGSTPLTQFK ARVASGSAAG VSGLVEVHLD SLNNPAIGSF
AIANTGGWQS WRTVPANISG TTGVHTVFLK FVTGSGQDFV NVNWFTFAP