Gene Acel_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0078 
Symbol 
ID4484670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp82505 
End bp82987 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID639728840 
ProductCarD family transcriptional regulator 
Protein accessionYP_871840 
Protein GI117927289 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.805764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCA AGGTTGGCGA GACGGTCGTC TACCCCCACC ACGGGGCCGC ACTGATCGAA 
GCAATCGAAA CGCGGGTCAT TAACGGCCAG GAGAAGACGT ATCTGGTCTT GAAGGTCGCC
CAGGGTGACC TTACCGTCCG CGTTCCTGCG GAAAATGCCG AATTCGTCGG GGTTCGCGAC
GTGGTGAGCC AAGACGGTCT TGACCGTGTC TTCGAAGTGC TTCGCGCTCC CCACACCGAG
GAGCCGACCA ACTGGTCCCG CCGGTACAAG GCCAACCTGG AGAAGCTTGC CTCGGGCGAC
GTCAACAAGG TCGCGGAGGT TGTCCGAGAT CTCTGGCGTC GTGATCGAGA CCGTGGACTT
TCGGCTGGCG AGAAGCGGAT GCTCGCGAAG GCGCGGCAGA TTCTTGTCAG CGAACTTGCG
CTGGCCGAAG GCACGAACGA AGACAAGGCT GAGGCGATCC TCGACGAGGT GCTCGGTTCC
TAG
 
Protein sequence
MTFKVGETVV YPHHGAALIE AIETRVINGQ EKTYLVLKVA QGDLTVRVPA ENAEFVGVRD 
VVSQDGLDRV FEVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRRDRDRGL
SAGEKRMLAK ARQILVSELA LAEGTNEDKA EAILDEVLGS