Gene Acel_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0058 
Symbol 
ID4484754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp63070 
End bp63741 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID639728820 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_871820 
Protein GI117927269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCG CGTGTGCCGA AATCCGGCTC TCGCTGGGCA GTTACGTGCT CGGCGCATTG 
GACCCCGGAG AGCGCGGCCA AGTCGAAGCG CACGTCAGCA GCTGCGCCGA CTGTCGTGAC
GAGCTCGCCT CGCTTGCCGC GCTCCCCGGC CTGCTCGCCC GGGTGAGCCT GCCGGAGGTG
ACGGCGACTC CGGCAGACGT GGACGCCGCC TTGCTCCCCC GGTTGCTTGC CCGGGTCACG
GCTGTGCGCC GCCGTCGGCG GGCGAGGTGG CTGATCTCGA CTGCTGCCGG GGTCGCCGTC
CTTGCCGCTG TGATCAGCGG AGTTGTCGTG GTCGCTCACC CGGGACCGTC AAGCGGAATC
GTCGCGCGTG GCTGGGATCC GGCTACCGGG ATCACCGCTG CGGTGAACGA GTGGCCTCGC
GCCTGGGGCA CTGCGCTGCA GATTCAGCTC TCCGGTGAGA CGACCGGCGC GTACGACGGG
CGCTGCCAGC TCATCGTGAT CGGCACGGAC GGCCGTCGGG AGGTGGCGGC AAGCTGGACG
GCGACCCCGT CCGGGCACAT CGTTGCCGCC GGTGCCACGA GCATGCGCCC GGCGGAGATC
GCGTCATTTC ACGTGGTGCG CTCCGACGGC ACCGTGCTGG TCGCTGTTAC CCCGCCGGCT
GCGGCCCGTT GA
 
Protein sequence
MTPACAEIRL SLGSYVLGAL DPGERGQVEA HVSSCADCRD ELASLAALPG LLARVSLPEV 
TATPADVDAA LLPRLLARVT AVRRRRRARW LISTAAGVAV LAAVISGVVV VAHPGPSSGI
VARGWDPATG ITAAVNEWPR AWGTALQIQL SGETTGAYDG RCQLIVIGTD GRREVAASWT
ATPSGHIVAA GATSMRPAEI ASFHVVRSDG TVLVAVTPPA AAR