Gene Acel_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0016 
Symbol 
ID4484675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp15592 
End bp16341 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID639728775 
Productsortase family protein 
Protein accessionYP_871778 
Protein GI117927227 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA CGCTGCAGAA ATCACCGGTT ACCACGATCC GCGGCTCGGC GCCCCGGCGG 
GTCCTGGGAG TGGCGGGGGA AATTCTCATC ACCCTGGGCG TGGTCGTGCT TCTCTTTGTC
GGCTACGACT TGTGGTTCAC CGGGCTGTAC ACGGCATCGG CGCAGCGCGA GCTCAAGCAC
GAGCTTGCGA TTACCTGGCA GACCGCGACG GCGAATCCGG CTCCGCCGCC TGCCCCGTCG
GCCGTGCCGA GTCCCGATGG GGTGCTCCCG GACGACGTCG TGCCGGGCAA TGCGCTCGCA
CTCATCCGTA TTCCGCGGCT GGGCCGGCAC TACGTGTACG CCATTGTCGA GGGTGTCTCG
ACTGCGGATC TCAAAAAGGG ACCGGGTCAC TACCCGGGGA CCGCCATGCC CGGCCAGGTG
GGAAATTTTG TCGTGTCCGG GCACCGCACG ACGTACCTCG CCCCGTTCAA CGGCTTGGAC
AAGTTGCGCC TCGGTGATCC GATCGTCATT GAGACGGCGA CAATGTGGTA CGTCTACCGC
GTCACTCAGA TGGAAACGGT CTTGCCGACC GATGTCGCCG TCATCCTCCC GGTCCCCGAT
CACCCGGGTG AACGGCCGAC CGAAGCCCTT ATCACTCTCA CGACCTGCAC CCCGAAATAC
TCCGCGTCCC ACCGGCTCGT CGTCCACGGC CGGCTCGAAA CGGCTCAGCC GAAATCCGCC
GGAATCCCGG CGGTGCTGCG GGAGGGATGA
 
Protein sequence
MTRTLQKSPV TTIRGSAPRR VLGVAGEILI TLGVVVLLFV GYDLWFTGLY TASAQRELKH 
ELAITWQTAT ANPAPPPAPS AVPSPDGVLP DDVVPGNALA LIRIPRLGRH YVYAIVEGVS
TADLKKGPGH YPGTAMPGQV GNFVVSGHRT TYLAPFNGLD KLRLGDPIVI ETATMWYVYR
VTQMETVLPT DVAVILPVPD HPGERPTEAL ITLTTCTPKY SASHRLVVHG RLETAQPKSA
GIPAVLREG