Gene Acel_0005 details

Gene Information

• Locus tag: Acel_0005
• Symbol: gyrB
• ID: 4484714
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidothermus cellulolyticus 11B
• Kingdom: Bacteria
• Replicon accession: NC_008578
• Strand: +
• Start bp: 4944
• End bp: 6944
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639728762
• Product: DNA gyrase subunit B
• Protein accession: YP_871767
• Protein GI: 117927216
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCGATC AAGCACTCTC GCTCGACGCG AGTAGTTACG ACGCCTCGTC CATCACGGTT 
CTCGAGGGCC TGGAGGCGGT CCGCAAGCGG CCCGGCATGT ACATCGGATC CACCGGAGAA 
CGCGGTCTGC ACCACTTGGT CTACGAGGTG GTCGACAACG CGGTCGACGA GGCGCTCGCC 
GGGGCTTGCG ATCGTATTGA CGTCACGCTT CTCGCTGACG GCGGCGTCCG AGTCGTTGAC 
AACGGCCGCG GCATACCCGT CGACGAACAC CCTGGCGAGA AACGCCCGGC GGTCGAGGTC 
GTGCTCACGG TCCTGCACGC CGGCGCCAAG TTTGGCGGCC GCGGTTACAA GGTTTCCGGA 
GGCCTGCACG GCGTCGGCGT CTCCGTCGTC AACGCCCTCT CCGAGCGGCT GGACGTCGAG 
GTTCACCGGG ACGGTTACGT CTGGCGGCAG AGTTACCGCC GGGGAACTCC AACCGGGCCC 
CTGCAACGCG GCGAGCCGAC CGACCGGACC GGAACGACGG TCACCTTCTG GCCTGACCCG 
GAGATATTCG AGACGACACG GTTCAGCTTT GAAACCTTGG CGAACCGTCT CCGGGAAATA 
GCCTTCCTCA ATAAGGGTCT CACCATCACG TTGCGGGACG AACGCCCCGC CGAGCATCTT 
GACTCCGACG ACGCGGAGAA GCCGGCCGGC GGCGACGACC CGACCGAGGT TTATTACCGG 
TACGACGGCG GTCTGGTGGA CTACGTCGCC CACCTCAACG CCACAAAGGA ACCGGCGCAC 
CGCAGCATCA TTTCCTTCGA GGCCCACGAT CCAGTCAGCG ACATGAGCCT TGAAGCGGCC 
CTCCAGTGGA ACACCGGGTA CACCGAGTCG GTGCACACTT TCGCCAACAC CATCAACACG 
CATGAGGGCG GCACGCACGA AGAGGGGTTC CGTGCTGCAC TGACCTATTT GGTGAACAAG 
TTCGGCGAGG AGTGGAACCT CATCAAGAAA AAGGAAGACC GGCTCACGGG AGAAGACATC 
AGGGAGGGCC TGACCGCGAT CCTCTCCATC AAATTGAAGG AACCGCAGTT CGAAGGGCAG 
ACCAAGACGA AGCTCGGCAA CACCGAGGTC AAGTCGTTCG TGCAGACCGT CTGCAATGAC 
CGGCTCGGCG AATGGTTCGA GAAGAATCCC GCGGAGGGCA AGGACATCGT CCGGAAAGCC 
ATTCAGGCGG CCACCGCCCG GATCGCGGCG CGCAAAGCGA GGGATTTGGC CAGGAACCGC 
AAAGGTCTCC TCGGCGGGGG AGGTCTTCCC GGAAAACTGG TCGACTGTCA GAGCACCAAT 
CCGGAGGAGT GCGAGCTCTT CATCGTCGAG GGTGACTCGG CCGGCGGTTC GGCGCGTCAA 
GGCCGGGATC CGCGGACCCA GGCCGTGTTG CCGATTCGAG GCAAAATCTT GAACGTCGAG 
CGGGCCCGCA TTGACAAGGT TTTGCAAAAC AACGAGGTAC AGGCGGTCAT CTCCGCCCTC 
GGCACCGGTG TGCACGACGA CTTCGACCTG GCCCGGCTGC GGTACCACAA GGTGGTGCTG 
ATGGCGGACG CGGACGTCGA CGGCCAACAC ATCCGTACCC TCCTCCTCAC CCTGCTCTTC 
CGCTTCATGA AGCCGCTCGT GGAAGCCGGG CACGTGTACC TCGCCCAGCC TCCGCTGTAC 
CGCATCAAGT GGAGCAATGC GCCGCACGAA TTCGCCTACT CCGACCGCGA ACGTGACGGA 
CTGGTCGAGG CCGGCCTTGC CGCCGGGAAG AAACTCCCCA AAGAACAGGG AATTCAGCGG 
TACAAGGGTC TCGGGGAGAT GAATCCCGAA GAGCTGTGGA CGACAACCAT GGACCCGGCG 
CAGCGGGTTC TCCTTCAAGT GAGTCTCGAC GATGCGGCGC GCGCGGACGA AATCTTCTCC 
ATCCTGATGG GCGACGACGT CGAGCAACGC CGGGCCTTCA TCCAGCGCAA CGCCAAGGAC 
GTTCGGTTCC TCGATATCTA G 

 

Protein sequence

MTDQALSLDA SSYDASSITV LEGLEAVRKR PGMYIGSTGE RGLHHLVYEV VDNAVDEALA 
GACDRIDVTL LADGGVRVVD NGRGIPVDEH PGEKRPAVEV VLTVLHAGAK FGGRGYKVSG 
GLHGVGVSVV NALSERLDVE VHRDGYVWRQ SYRRGTPTGP LQRGEPTDRT GTTVTFWPDP 
EIFETTRFSF ETLANRLREI AFLNKGLTIT LRDERPAEHL DSDDAEKPAG GDDPTEVYYR 
YDGGLVDYVA HLNATKEPAH RSIISFEAHD PVSDMSLEAA LQWNTGYTES VHTFANTINT 
HEGGTHEEGF RAALTYLVNK FGEEWNLIKK KEDRLTGEDI REGLTAILSI KLKEPQFEGQ 
TKTKLGNTEV KSFVQTVCND RLGEWFEKNP AEGKDIVRKA IQAATARIAA RKARDLARNR 
KGLLGGGGLP GKLVDCQSTN PEECELFIVE GDSAGGSARQ GRDPRTQAVL PIRGKILNVE 
RARIDKVLQN NEVQAVISAL GTGVHDDFDL ARLRYHKVVL MADADVDGQH IRTLLLTLLF 
RFMKPLVEAG HVYLAQPPLY RIKWSNAPHE FAYSDRERDG LVEAGLAAGK KLPKEQGIQR 
YKGLGEMNPE ELWTTTMDPA QRVLLQVSLD DAARADEIFS ILMGDDVEQR RAFIQRNAKD 
VRFLDI