Gene Acel_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0002 
Symbol 
ID4484711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1921 
End bp3084 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID639728759 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_871764 
Protein GI117927213 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATTCC AAGTTGACCG AGGCCTCTTC GCAGACGCGG TCGCATGGTC GGCGCGGACG 
TTGCCTGCTC GTCCGTCGAT GCCGGTACTA GGCGGATTGC TGATCGAGGC GATGGACGAG
CTGCGGATCG CAAGCTTCGA TTACGAGGTG TCAGCCAGTG CGTCAATTGA CGCGACAATT
GCGGAGACGG GACGGGCGCT GGTCTCTGGG CGCTTGCTGG CGGAGATCAG CCGGAACCTC
CCTGCGCAAC CCGTGGACGT CGAACTCGAC GGCTCCCGCC TCGTGATCGC CTGTGGGGCT
TCCCGTTTCA CCCTTCCGTT GCTGCCGATC GAGGAGTACC CGAACCTGCC GCCCCTGCCT
ACGCTCGCGG GTACCATCGG GGCTGATCTT TTTGCCACGG CTGTTTCTCA GGTCGTGGTG
GCGGCCGGAC GCGACGACAC ACTTCCCGTT CTGACCGGCG TCCGGATGGA AATTGATCGA
GACGTGATGA CGTTGGCGGC AACGGATCGG TATCGGCTCG CGGTGCGTGA CTTTCACTGG
CAGCCGGCCC GCGGCGATCT CACCGCGGCG GCGCTGATTC CAGCGCGCAC TCTCGGCGAG
GTTGCCAAGG CCTTGACGAC CGGGGCGGAA GTGACGATCT TTTTGTCGAC GGAATCGACG
TCGAACGAGA ATCTCATCGG CTTCTCCGGC CGTGGCACCT CAGGAGAACG GCAAACGACG
ACGCGCCTGA TCGATGGTGA GTACGTCAAA TACCGGTCAC TCCTGCCGGC GGAAGCCGCT
GCGACTGCAC AGGTTGCGAC CGCGGCTCTG ATCGAGGCAG TACGCCGCGT GTCACTTGTC
GCACCGCGCA CGTCCCCGGT ACGGCTGACG TTCAATCCGG ATCGGCTGAC GCTGGAAGCC
GGGACCGGCG ATGACGCTCA AGCATCGGAG TGGATCGACG CGCGGTTCGA AAGCAGCACC
GGCGATGACG AGTTCGTCAT TGCGTTCAAT CCCGCGTATC TCCTCGATGG TCTTGGCGCG
GTGGAGTCCG AGACGACGAC GCTGTCGTTC ACCTCACCCA ACAAGCCGGC GGTCCTGCGT
GCCGGGAAAG ATGCGGATAC GTCAGCGGAT GCCGGTTCCG ACGACTACCG GTATCTGCTC
ATGCCGGTCC GTCTTGGCGG CTGA
 
Protein sequence
MRFQVDRGLF ADAVAWSART LPARPSMPVL GGLLIEAMDE LRIASFDYEV SASASIDATI 
AETGRALVSG RLLAEISRNL PAQPVDVELD GSRLVIACGA SRFTLPLLPI EEYPNLPPLP
TLAGTIGADL FATAVSQVVV AAGRDDTLPV LTGVRMEIDR DVMTLAATDR YRLAVRDFHW
QPARGDLTAA ALIPARTLGE VAKALTTGAE VTIFLSTEST SNENLIGFSG RGTSGERQTT
TRLIDGEYVK YRSLLPAEAA ATAQVATAAL IEAVRRVSLV APRTSPVRLT FNPDRLTLEA
GTGDDAQASE WIDARFESST GDDEFVIAFN PAYLLDGLGA VESETTTLSF TSPNKPAVLR
AGKDADTSAD AGSDDYRYLL MPVRLGG