Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_R0139 |
Symbol | |
ID | 4480121 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4692306 |
End bp | 4695200 |
Gene Length | 2895 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640720199 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TATGGTTAAG CGACTAAGCG TATACGGTGG ATGCCTTGGC AGTCAGAGGC GATGAAGGAC GTAGTAACTT GCGAAAAGCG TTGGCGAGCT AGTAACAAGC ATTTGAGCTA ACGATGTCCG AATGGGGGAA CCCGGCAGCA TAAGCTGTCA TCGTAACGTG AATACATAGC GTTACGAGGC AAACGAGGGG AACTGAAACA TCTAAGTACC CTTAGGAAAA GAAATCAACC GAGATTCCCC TAGTAGCGGC GAGCGAACGG GGATTAGCCC TTAAGTCAGA GGGGTGTTAG TGGAATGGTC TGGAAAGTCC AGCGGCACAG GGTGATAGCC CCGTACACGA AAACTAACCT TTGATGAAAA CGAGTAAGGC GGGACACGTG ATATCCTGTT TGAATATGGG GGGACCATCC TCCAAGGCTA AATACTCCTG ACTGACCGAT AGTGAACCAG TACCGTGAGG GAAAGGCGAA AAGAACCCCT GTGAGGGGAG TGAAATAGAA CCTGAAACCG TATACGTACA AGCAGTGGGA GCGGTTCTTG AGACCGTGAC TGCGTACCTT TTGTATAATG GGTCAGCGAC TTACGTTTTG TAGCGAGGTT AAGCGAATAG CGGAGCCGTA GGGAAACCGA GTGTTAACTG CGCGTTTAGT TGCAAGGCGT AGACCCGAAA CCCGGTGATC TAGCCATGGG CAGGTTGAAG GTTGAGTAAC ATCAACTGGA GGACCGAACC GACTAATGTT GAAAAATTAG CGGATGACTT GTGGCTGGGG GTGAAAGGCC AATCAAACCG GGAGATATCT GGTTCTCCTC GAAAGCTATT TAGGTAGCGC CTCGGACGAA CACCTTTGGG GGTAGAGCAC TGTTAAGGCT AGGGGGTCAT CCCGACTTAC CAACCCTTTG CAAACTCCGA ATACCAAAGA GTGCTATCCG GGAGACAGAC GGCGGGTGCT AACGTCCGTC GTCAAAAGGG AAACAACCCA GACCGTCAGC TAAGGTCCCA AAGTGTATGT TAAGTGGGAA ACGATGTGGG AAGGCTTAGA CAGCTAGGAT GTTGGCTTAG AAGCAGCCAT CATTTAAAGA AAGCGTAATA GCTCACTAGT CGAGTCGGCC TGCGCGGAAG ATGTAACGGG GCTAAACATA CCACCGAAGC TACGGGTGCA ATCCATTAGG GTTGCGCGGT AGAGGAGCGT TCTGTAAGCC GTTGAAGGTG AAGGGGTAAC CCACACTGGA GGTATCAGAA GTGCGAATGC TGACATGAGT AACGATAAAG GGGGTGAAAA ACCCCCTCGC CGAAAGACCA AGGGTTCCTG TCCAACGTTA ATCGGGGCAG GGTGAGTCGA CCCCTAAGGC GAGGCCGAAA GGCGTAGTCG ATGGGAAACA GATTAATATT TCTGTACTTC CGCTAACTGC GATGGAGAGA CGGAGAAGGC TAGGCTAGCG CGGCGTTGGT AGTCCGCGTT TAAGGTGGTA GGTGGGTGAC TTAGGCAAAT CCGGGTCACT ATACACTGAG AGCTGATGAC GAGTCCCCAA GGGGATGAAG TAGTTGATGC CATGCTTCCA GGAAAATCTT CTAAGCTTCA GGTTAGCGGG AATCGTACCC CAAACCGACA CAGGTGGTCG GGTAGAGAAT ACCAAGGCGC TTGAGAGAAC TCGGCTGAAG GAACTAGGCA AAATGGTACC GTAACTTCGG GAGAAGGTAC GCTGCTGTTG GTGATGGGAC TTGCTCCCTA AGCTGACGGC AGTCGCAGAT ACCAGGTGGC TGCAACTGTT TATCAAAAAC ACAGCACTGT GCAAAATCGC AAGATGACGT ATACGGTGTG ACGCCTGCCC GGTGCCGGAA GGTTAATTGA TTGGGTTATC GCAAGAGAAG CTCATGATCG AAGCCCCGGT AAACGGCGGC CGTAACTATA ACGGTCCTAA GGTAGCGAAA TTCCTTGTCG GGTAAGTTCC GACCTGCACG AATGGCGTAA TGATGGCCAC GCTGTCTCCA GCCGAGACTC AGTGAAGTTG AAATTGCGGT GAAGATGCCG TATACCCGCG GCTAGACGGA AAGACCCCGT GAACCTTTAC TATAGCTTGG CACTGAACAT TGACCCTACA TGTGTAGGAT AGGTGGGAGA CTTTGAAGCG GGAACGCTAG TTCTCGTGGA GTCGTCCTTG AAATACCACC CTTGTAGTGT TGATGTTCTA ACTTGGGCCC CTAATCGGGG TTAAGGACAG TGCCTGGTGG GTAGTTTGAC TGGGGCGGTC TCCTCCCAAA GAGTAACGGA GGAGCACGAA GGTTGGCTAA GTACGGTCGG ACATCGTACG GTTAGTGCAA TGGCATAAGC CAGCTTAACT GCGAGACAGA CACGTCGAGC AGGTACGAAA GTAGGTCATA GTGATCCGGT GGTTCTGAAT GGAAGGGCCA TCGCTCAACG GATAAAAGGT ACTCCGGGGA TAACAGGCTG ATACCGCCCA AGAGTTCATA TCGACGGCGG TGTTTGGCAC CTCGATGTCG GCTCATCACA TCCTGGGGCT GAAGTCGGTC CCAAGGGTAT GGCTGTTCGC CATTTAAAGT GGTACGCGAG CTGGGTTCAG AACGTCGTGA GACAGTTCGG TCCCTATCTG CCGTGGGCGT TGGATGATTG AGGGGAGTTG CTCCTAGTAC GAGAGGACCG GAGTGAACGA ACCGCTGGTG TTCGGGTTGT CATGCCAATG GCATTGCCCG GTAGCTATGT TCGGAATCGA TAACCGCTGA AAGCATCTAA GCGGGAAGCG AGCCCCAAGA TGAGTCATCC CTTGGACTTT AAGTCCACTA AAGAGCCGTT CGAGACTAGG ACGTTGATAG GTCAGGTGTG TAAGCGTTGT GAGGCGTTGA GCTAACTGAT ACTAATGACT CGAGAGGCTT AACCA
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Protein sequence | |
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