| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_R0002 |
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| Symbol | |
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| ID | 4478919 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 52804 |
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| End bp | 55698 |
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| Gene Length | 2895 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640720071 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000281941 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TGGTTAAGCG ACTAAGCGTA TACGGTGGAT GCCTTGGCAG TCAGAGGCGA TGAAGGACGT
AGTAACTTGC GAAAAGCGTT GGCGAGCTAG TAACAAGCAT TTGAGCTAAC GATGTCCGAA
TGGGGGAACC CGGCCGCATA AGCGGTCATC ATGTAGTGAA TACATAGCTA CATGAGGCAA
ACGAGGGGAA CTGAAACATC TAAGTACCCT TAGGAAAAGA AATCAACCGA GATTCCCCTA
GTAGCGGCGA GCGAACGGGG ATTAGCCCTT AAGTCAGAGG GGTGTTAGTG GAATGGTCTG
GAAAGTCCAG CGGCACAGGG TGATAGCCCC GTACACGAAA ACTAACCTTT GATGAAAACG
AGTAAGGCGG GACACGTGAT ATCCTGTTTG AATATGGGGG GACCATCCTC CAAGGCTAAA
TACTCCTGAC TGACCGATAG TGAACCAGTA CCGTGAGGGA AAGGCGAAAA GAACCCCTGT
GAGGGGAGTG AAATAGAACC TGAAACCGTA TACGTACAAG CAGTGGGAGC GGTTCTTGAG
ACCGTGACTG CGTACCTTTT GTATAATGGG TCAGCGACTT ACGTTTTGTA GCGAGGTTAA
GCGAATAGCG GAGCCGTAGG GAAACCGAGT GTTAACTGCG CGTTTAGTTG CAAGGCGTAG
ACCCGAAACC CGGTGATCTA GCCATGGGCA GGTTGAAGGT TGAGTAACAT CAACTGGAGG
ACCGAACCGA CTAATGTTGA AAAATTAGCG GATGACTTGT GGCTGGGGGT GAAAGGCCAA
TCAAACCGGG AGATATCTGG TTCTCCTCGA AAGCTATTTA GGTAGCGCCT CGGACGAACA
CCTTTGGGGG TAGAGCACTG TTAAGGCTAG GGGGTCATCC CGACTTACCA ACCCTTTGCA
AACTCCGAAT ACCAAAGAGT GCTATCCGGG AGACAGACGG CGGGTGCTAA CGTCCGTCGT
CAAAAGGGAA ACAACCCAGA CCGTCAGCTA AGGTCCCAAA GTGTATGTTA AGTGGGAAAC
GATGTGGGAA GGCTTAGACA GCTAGGATGT TGGCTTAGAA GCAGCCATCA TTTAAAGAAA
GCGTAATAGC TCACTAGTCG AGTCGGCCTG CGCGGAAGAT GTAACGGGGC TAAACATACC
ACCGAAGCTA CGGGTGCAAT CCATTAGGGT TGCGCGGTAG AGGAGCGTTC TGTAAGCCGT
TGAAGGTGAA GGGGTAACCC ACACTGGAGG TATCAGAAGT GCAAATGCTG ACATGAGTAA
CGATAAAGGG GGTGAAAAAC CCCCTCGCCG AAAGACCAAG GGTTCCTGTC CAACGTTAAT
CGGGGCAGGG TGAGTCGACC CCTAAGGCGA GGCCGAAAGG CGTAGTCGAT GGGAAACAGA
TTAATATTTC TGTACTTCCG CTAACTGCGA TGGAGAGACG GAGAAGGCTA GGCTAGCGCG
GCGTTGGTAG TCCGCGTTTA AGGTGGTAGG TGGGTGACTT AGGCAAATCC GGGTCACTAT
ACACTGAGAG CTGATGACGA GTCCCCAAGG GGATGAAGTA GTTGATGCCA TGCTTCCAGG
AAAATCTTCT AAGCTTCAGG TTAGCGGGAA TCGTACCCCA AACCGACACA GGTGGTCGGG
TAGAGAATAC CAAGGCGCTT GAGAGAACTC GGCTGAAGGA ACTAGGCAAA ATGGTACCGT
AACTTCGGGA GAAGGTACGC TGCTGTTGGT GATGGGACTT GCTCCCTAAG CTGACGGCAG
TCGCAGATAC CAGGTGGCTG CAACTGTTTA TCAAAAACAC AGCACTGTGC AAAATCGCAA
GATGACGTAT ACGGTGTGAC GCCTGCCCGG TGCCGGAAGG TTAATTGATT GGGTTATCGC
AAGAGAAGCT CATGATCGAA GCCCCGGTAA ACGGCGGCCG TAACTATAAC GGTCCTAAGG
TAGCGAAATT CCTTGTCGGG TAAGTTCCGA CCTGCACGAA TGGCGTAATG ATGGCCACGC
TGTCTCCAGC CGAGACTCAG TGAAGTTGAA ATTGCGGTGA AGATGCCGTA TACCCGCGGC
TAGACGGAAA GACCCCGTGA ACCTTTACTA TAGCTTGGCA CTGAACATTG ACCCTACATG
TGTAGGATAG GTGGGAGACT TTGAAGCGGG AACGCTAGTT CTCGTGGAGT CGTCCTTGAA
ATACCACCCT TGTAGTGTTG ATGTTCTAAC TTGGGCCCCT AATCGGGGTT AAGGACAGTG
CCTGGTGGGT AGTTTGACTG GGGCGGTCTC CTCCCAAAGA GTAACGGAGG AGCACGAAGG
TTGGCTAAGT ACGGTCGGAC ATCGTACGGT TAGTGCAATG GCATAAGCCA GCTTAACTGC
GAGACAGACA CGTCGAGCAG GTACGAAAGT AGGTCATAGT GATCCGGTGG TTCTGAATGG
AAGGGCCATC GCTCAACGGA TAAAAGGTAC TCCGGGGATA ACAGGCTGAT ACCGCCCAAG
AGTTCATATC GACGGCGGTG TTTGGCACCT CGATGTCGGC TCATCACATC CTGGGGCTGA
AGTCGGTCCC AAGGGTATGG CTGTTCGCCA TTTAAAGTGG TACGCGAGCT GGGTTCAGAA
CGTCGTGAGA CAGTTCGGTC CCTATCTGCC GTGGGCGTTG GATGATTGAG GGGAGTTGCT
CCTAGTACGA GAGGACCGGA GTGAACGAAC CGCTGGTGTT CGGGTTGTCA TGCCAATGGC
ATTGCCCGGT AGCTATGTTC GGAATCGATA ACCGCTGAAA GCATCTAAGC GGGAAGCGAG
CCCCAAGATG AGTCATCCCT TGGACTTTAA GTCCACTGAA GAGCCGTTCG AGACTAGGAC
GTTGATAGGT CAGGTGTGTA AGCGTTGTGA GGCGTTGAGC TAACTGATAC TAATGACTCG
AGAGGCTTAA CCATA
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| Protein sequence | |
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