| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4138 |
|---|
| Symbol | |
|---|
| ID | 4480355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4970492 |
|---|
| End bp | 4971370 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639728756 |
|---|
| Product | chromosome segregation DNA-binding protein |
|---|
| Protein accession | YP_871761 |
|---|
| Protein GI | 117922569 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.001205 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000138083 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTAA AGAAAAGAGG GTTAGGCAAA GGCTTAGATG CTTTACTGAG TAACAGCCAC
GCCGCGAGTA AAAAACACAC GGAAGAAGTG GTTGTTGTCG ATAAAAAAGA AGAACTTATT
CATCTGGATC TCGACCTGCT ACAACCGGGT AAATACCAAC CTCGTAAGGA CATGTCTCCC
GAGGCGTTAG AAGAACTCGC CCATTCCATC CGCAATCAAG GCATTATTCA GCCGATTGTG
GTGCGTCCTG TCAGCGATAG CCAATATGAA ATCATCGCCG GTGAGCGCCG TTGGCGCGCT
TCCCAATTGG CGGGTGTCGA AAAAATCCCT TGTATCGTTA AACCGGTTCC CGATGAAGCG
GCGGTTGCCA TTGCGTTGAT TGAAAACATT CAACGTGAAG ACTTAAATGC CATGGAAGAA
GCCATTGCAT TACAACGTTT GATGCAAGAA TTTGAGCTGA CTCACCAACA GGTTGCCGAT
GTTGTGGGAA AATCTCGCGC GAGTGTATCT AACTTGTTAC GGTTAAACGG TTTAAATGAA
CCGGTTAAGC GTTTACTCGA GTATGGCGAC ATTGATATGG GCCATGCACG CGCTTTGCTC
GCAATTGAGG GTGAAGAACA AACAAATCTG GCGAGATTAG TGGCTGCCAA GGAATTAACC
GTTCGGGAAA CTGAACGATT GATTAATCAA ACCTTAAATC CGCCCAAACC CGTCGAAACT
ACGACTAAAG ATCAAGATGT TTGTCGTTTA GAGCAGCAGT TAATTGAAAG ATTAGGTGCC
AAGGTTTCGA TCGCTCATAG CAGTAAGGGT AAGGGTAAAA TTGTAATTAA CTATCAGAAT
CTGGCTGAAT TAGACGGAAT TCTTAGCAAA ATTCGTTAA
|
|---|
| Protein sequence | MTLKKRGLGK GLDALLSNSH AASKKHTEEV VVVDKKEELI HLDLDLLQPG KYQPRKDMSP
EALEELAHSI RNQGIIQPIV VRPVSDSQYE IIAGERRWRA SQLAGVEKIP CIVKPVPDEA
AVAIALIENI QREDLNAMEE AIALQRLMQE FELTHQQVAD VVGKSRASVS NLLRLNGLNE
PVKRLLEYGD IDMGHARALL AIEGEEQTNL ARLVAAKELT VRETERLINQ TLNPPKPVET
TTKDQDVCRL EQQLIERLGA KVSIAHSSKG KGKIVINYQN LAELDGILSK IR
|
|---|
| |