Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4137 |
Symbol | |
ID | 4480354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4969883 |
End bp | 4970266 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639728755 |
Product | ATP synthase I chain |
Protein accession | YP_871760 |
Protein GI | 117922568 |
COG category | [C] Energy production and conversion |
COG ID | [COG3312] F0F1-type ATP synthase, subunit I |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000292688 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000119081 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAGTAAGG TTTTAGCGCG TCGTGGCCGG TGGTCAGCCT ATAAATTGGT GATGATGCAG GCGGCGGTGG CTGGGGGTGC TTCAATTCTC TTTTTCGTCG TGTGGGGAGT TCAGTTTGGC TATTCTGCGT TAGCAGGTGG TTCAATTGCT GTGCTCCCTA ATTTTGTATT CGCGACCCTC GCTTTCTCTC ATACGGGAGC AAGTTCAGCA GCAAAAGTGA TTAAAACTTT TTACTGGGGG GAAGCGGTAA AGTTGCTGTT AACCATCGCA ATGTTTTCAT TGGTGTTTAG CAAGCTTGAG GTGGCATTTT TGCCGCTTTT TGTTTGTTAT GTGCTGACGT TAATAGTGCA TTGGACAGCT CCTTTATACT TCAAGCAAAG TTAA
|
Protein sequence | MSKVLARRGR WSAYKLVMMQ AAVAGGASIL FFVVWGVQFG YSALAGGSIA VLPNFVFATL AFSHTGASSA AKVIKTFYWG EAVKLLLTIA MFSLVFSKLE VAFLPLFVCY VLTLIVHWTA PLYFKQS
|
| |