Gene Shewana3_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4131 
Symbol 
ID4480348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4965228 
End bp4966088 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID639728749 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_871754 
Protein GI117922562 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0781928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG CTAAAGAGAT TAAAACCAAG ATCGCGAGTG TGAAAAACAC TCAGAAGATC 
ACGTCCGCCA TGGAAATGGT GGCAGCCAGC AAAATGCGCA GAGCGCAGGA ACGCATGGCT
GCAAGCCGTC CATACGCGGA AAGCATGCGT AAGGTGATCG GTCACGTAGC GCAAGGTTCT
CTCGAGTATA AACACCCCTA CTTAGAGGTG AGAGAGGCCA AGCGGGTTGG TTACATTGTT
GTAGCAACCG ACCGTGGCCT TTGTGGTGGT CTGAACGTCA ACCTCTTTAA AAAGGTTGTT
TCAGACGTGA AAAGCTGGAA AGAGCAAGGT GCAGAATTTG AATTTTGCCC AATTGGTGCT
CGTAGTGTTC AGTTTTTCAA AAGCTTTGGC GGTCAAGTAT CTGCCCATGC TTCAGGTTTA
GGCGATGCGC CAAAGCTCGC TGACCTGATC GGGACAGTAC GTGTAATGCT AGATGCTTAC
AACGAAGGCA AACTGGATCG TCTGTACGTA GTGTTCAACA AGTTTGTAAA CACTATGACG
CAGACTCCTG TGATCGAGCA GCTGCTACCT TTGCCTAAAT CGGAAGATGA TGAGGTTGCT
CATCGTTGGG ATTATATCTA CGAGCCAGAT CCAAAAGCCC TTTTGGATAC CTTATTGGTT
CGTTATGTAG AATCTCAGGT TTACCAAGGT GTTGTTGAAA ACATTGCTTC TGAACAGGCT
GCCCGTATGG TGGCGATGAA GGCGGCAACA GACAACGCGG GTACACTGAT TGACGATTTG
CAATTGGTCT ATAACAAGGC TCGTCAGGCT GCGATTACGC AGGAACTGTC GGAAATTGTT
TCTGGTGCCT CTGCGGTTTA G
 
Protein sequence
MAGAKEIKTK IASVKNTQKI TSAMEMVAAS KMRRAQERMA ASRPYAESMR KVIGHVAQGS 
LEYKHPYLEV REAKRVGYIV VATDRGLCGG LNVNLFKKVV SDVKSWKEQG AEFEFCPIGA
RSVQFFKSFG GQVSAHASGL GDAPKLADLI GTVRVMLDAY NEGKLDRLYV VFNKFVNTMT
QTPVIEQLLP LPKSEDDEVA HRWDYIYEPD PKALLDTLLV RYVESQVYQG VVENIASEQA
ARMVAMKAAT DNAGTLIDDL QLVYNKARQA AITQELSEIV SGASAV