Gene Shewana3_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4130 
Symbol 
ID4480347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4963801 
End bp4965192 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content48% 
IMG OID639728748 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_871753 
Protein GI117922561 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.145707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG GTACTGTTGT CCAAGTGATT GGCGCGGTTG TGGACGTAGA GTTTCCACAA 
GATGCCGTAC CTCAGGTATA TGACGCTCTG AAGATCACAG GTGAAGGCTC CTGTAATGGT
TTGGTGCTGG AAGTTCAGCA ACAACTAGGT GGTGGTGTAG TTCGTACCAT CGCTATGGGT
ACTTCTGATG GTCTGCGTCG TGGTCTTGAG GTAGTAAACT CAGGTTCACC TATTTCTGTT
CCTGTTGGTA CTGCCACTCT TGGCCGTATC ATGAACGTAT TAGGCGACCC TATTGATGAA
GCTGGCGCAA TTGGCGAAGA AGAACGTTAT GTGATTCACC GCAGCGCTCC TTCATACGAA
GAGCAATCAA ACACGACTGA ACTGTTAGAG ACTGGTATCA AGGTTATCGA CCTTGTATGT
CCATTCGCTA AGGGTGGTAA AGTAGGTCTG TTCGGTGGTG CGGGTGTTGG TAAGACAGTT
AACATGATGG AACTGATTAA CAACATCGCT AAAGCTCACT CAGGTCTTTC TGTATTCGCC
GGTGTAGGTG AGCGTACTCG TGAGGGTAAC GACTTCTACT ACGAGATGAA GGATTCTGGC
GTTCTCGACA AAGTAGCCAT GGTTTATGGT CAAATGAACG AGCCACCAGG AAACCGTCTG
CGTGTAGCAC TGACCGGTCT GACTATGGCT GAAAAATTCC GTGACGAAGG TCGTGACGTT
CTGTTGTTCG TTGACAACAT CTACCGTTAC ACCCTAGCCG GTACTGAAGT ATCAGCACTG
TTAGGTCGTA TGCCTTCTGC AGTAGGTTAC CAACCCACTC TGGCTGAAGA AATGGGCGTT
CTGCAAGAGC GTATTACTTC AACTAAGACT GGTTCTATTA CCTCTGTACA AGCGGTATAC
GTACCTGCGG ACGACTTGAC TGACCCGTCA CCAGCAACAA CCTTCGCTCA CTTAGATGCG
ACTGTTGTAT TGTCACGTCA AATCGCTTCT CTGGGTATTT ACCCAGCGGT TGACCCACTG
GATTCGACTT CTCGTCAATT AGATCCATTA GTGGTTGGTC AAGAGCACTA TGACGTAGCT
AACGGTGTAC AAACTGTTCT GCAACGCTAC AAAGAGCTGA AAGACATCAT TGCGATTCTC
GGTATGGACG AACTGTCAGA CGAAGATAAG ATGACCGTTT CCCGTGCTCG TAAGATTGAG
CGTTTCTTGT CTCAGCCTTT CCACGTAGCA GAAGTCTTTA CTGGTTCTCC TGGTAAGTAC
GTATCTCTGA AAGACACTAT CCGTGGCTTC AAGGGAATTC TGAGTGGCGA GTTCGACCAC
ATTCCAGAAC AAGCGTTCTA CATGGTTGGT TCTATCGACG AAGCTGTCGA GAAAGCTAAC
AAAAAGAAAT AA
 
Protein sequence
MSTGTVVQVI GAVVDVEFPQ DAVPQVYDAL KITGEGSCNG LVLEVQQQLG GGVVRTIAMG 
TSDGLRRGLE VVNSGSPISV PVGTATLGRI MNVLGDPIDE AGAIGEEERY VIHRSAPSYE
EQSNTTELLE TGIKVIDLVC PFAKGGKVGL FGGAGVGKTV NMMELINNIA KAHSGLSVFA
GVGERTREGN DFYYEMKDSG VLDKVAMVYG QMNEPPGNRL RVALTGLTMA EKFRDEGRDV
LLFVDNIYRY TLAGTEVSAL LGRMPSAVGY QPTLAEEMGV LQERITSTKT GSITSVQAVY
VPADDLTDPS PATTFAHLDA TVVLSRQIAS LGIYPAVDPL DSTSRQLDPL VVGQEHYDVA
NGVQTVLQRY KELKDIIAIL GMDELSDEDK MTVSRARKIE RFLSQPFHVA EVFTGSPGKY
VSLKDTIRGF KGILSGEFDH IPEQAFYMVG SIDEAVEKAN KKK