| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4127 |
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| Symbol | |
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| ID | 4480344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4959434 |
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| End bp | 4961542 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639728745 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_871750 |
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| Protein GI | 117922558 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00050238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.542591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTTA AATATTCAGT GGTTGGTTTG GCCGTAGGGT CTGCATTAAT GGCGATGCCT
GTTATGGCCG AAGCGCCAAA TGATGAAAAT ATTGAGCGCA TTAATGTGAC TGGCCGTACG
TTTAACGACT ATAAAGTCGG CAGTGCATCA GGTGCTATGC GTGGTGATAT CGATTTAATG
GATACACCAC AATCTGTGAA TGTCATCCCC GACTTTGTTA CCGATGAGCA ATTAGCGACT
AACCTTGCGG AAGTCTTAGT AAACGATTCA AGTGTGACAG CGGGAACTAC CCGTTGGAAC
CGCCAAGTCT TCAGTATTCG TGGTTTTGAA TTAGATTCGG GCAACGGTTA TCTGATCAAC
GGCCATCAGC AATGGTCCCA CTATGTTCAA CCTATCGAAA CCCTGCAACA AGTCGAAGTG
CTGAAAGGCC CTTCGAGCAT GTTGTATGGC CAATCTGGAC CTGGCGGTTT GGTGAATATG
GTCACCAAGA AGCCCACCTA TGATTCTATG CTCAACTTAG GGTTTGATAC TGACGGTTAC
GGCTCTACCC GTGCGCAGTT AGATGCGGGT GGCAGTTTAA ATGAGGCTCA AAGCGTTCGT
TACCGTGGTG TGTTAGTCAA ACAAGACACT AAATACTGGC GTGAATATTC AACGACCGAT
GAAAACCAAG AGCGTGATCG TTGGTTAGGT TATTTGAACC TAGAATTCGA TATCAGTGAT
GATCTGTTAT TGTCGCTGAA ATACGACCAT ACCCAAGATA AAACCGGAAT TGATGCCGGC
GGTTGGTTAG ATAAGCAAGG CAATGTTGTT GGTCAACGTA AAACCATCTG GGATGCGCCC
TGGGCCTTTA CCGATAACAC GGTTTCTAAC TTAGGTGCCG ATTTAACTTG GCATATGAAT
GACGATTGGA AAGTTAAACT GGGTTATAAC GATCAACAGT TTAACCGCCA GCGTTTCGAT
TCTGCGCCGC AATATAATGA AGACCCATTC ACCTCGGGAT ACAGCATTAG ACCATTCGAT
CGTTACGATG ATTGGCAGCA TAAAACCGCC TATGTCGATT TTACAGGCGA GTTTGCATTA
GCGGGTATGG AGCATCAGTT GCTGATTGGC GCTAACTATC TCGATTACTT CTACCAGCAA
CAAATCGCCC GTGGCGCAGC GCAAACCGTT ATTCCTGGTC AGCCAGTGAT TCAACCGGAT
CTTGATTACC ATACAGGTAA GAAAGGCACT CCAAATGAAT ATAAATACTA CGGTTTCTAT
CTGCAAGATT TAATGACCAT CAACGAACAA TGGAAATTGC TCGCTGGGGT ACGTTATGAC
GAGCAGAAAA AAGATGGATT TGGTGAAAAT AGCTATGCCG TATCACCTAA ATTTGGGGTG
ATCTATTCAC CAATGACCAA TGGCAGCATA TACGTTAACT ACTCTAAGAG CTTTACACCG
CAAGGTGGTA TTACCGACCC TCTAAATGTT AATCATGACA CTAACCTCAA ACCTGAATAT
GGCATTCAAT ATGAAGTGGG GACTAAGTGG GAACTGTTTG ACGATAGCTT GTTATTAACG
GCTGCGGTAT TTGATGTCAC GCTTGAGAAT ATCTCTATCA ATGAGGTGCT GACAGCAAGT
GACCCACGAA GTGAAGATGG AAAATACACT TCAATCACCA CCCAAGGCGG TGAGCAAAAA
CATCGCGGCT TTGAAGTCGG TGCCCAAGGT AAGCTAGGCG ATAGCTGGTT TGTGACTTCA
TCTATGATGT ACCTCGATGC TGAGTATCAA ACGGGTGATG AGCGCGAAGG TAAAACGCCT
ATCGATGCCC CTGAATGGTC GGCCAATATC TGGACTCGTT ATGAAGTAAC CGATAACTTT
GCAATGAACT TCGGTGCTAT CTACGTCGGA GAGCGTTTTG CCGATGTGAA TAACACTATC
AGTAAAGACG GTTATGTTCG CTTCGATATC GGTGCTGCCT ACACTATGGA TATTATGGGT
AAAGATGTAA GCATCCGCGC GAACGTGAGA AACCTGTTTG ATACCGATTA TATCGATGGC
GGCCAATACA ATATGGTGAC CCTAGGCCAA GATCGTAACT TCAGTGTGGC ACTTGAAGCT
AAGTTCTAA
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| Protein sequence | MVFKYSVVGL AVGSALMAMP VMAEAPNDEN IERINVTGRT FNDYKVGSAS GAMRGDIDLM
DTPQSVNVIP DFVTDEQLAT NLAEVLVNDS SVTAGTTRWN RQVFSIRGFE LDSGNGYLIN
GHQQWSHYVQ PIETLQQVEV LKGPSSMLYG QSGPGGLVNM VTKKPTYDSM LNLGFDTDGY
GSTRAQLDAG GSLNEAQSVR YRGVLVKQDT KYWREYSTTD ENQERDRWLG YLNLEFDISD
DLLLSLKYDH TQDKTGIDAG GWLDKQGNVV GQRKTIWDAP WAFTDNTVSN LGADLTWHMN
DDWKVKLGYN DQQFNRQRFD SAPQYNEDPF TSGYSIRPFD RYDDWQHKTA YVDFTGEFAL
AGMEHQLLIG ANYLDYFYQQ QIARGAAQTV IPGQPVIQPD LDYHTGKKGT PNEYKYYGFY
LQDLMTINEQ WKLLAGVRYD EQKKDGFGEN SYAVSPKFGV IYSPMTNGSI YVNYSKSFTP
QGGITDPLNV NHDTNLKPEY GIQYEVGTKW ELFDDSLLLT AAVFDVTLEN ISINEVLTAS
DPRSEDGKYT SITTQGGEQK HRGFEVGAQG KLGDSWFVTS SMMYLDAEYQ TGDEREGKTP
IDAPEWSANI WTRYEVTDNF AMNFGAIYVG ERFADVNNTI SKDGYVRFDI GAAYTMDIMG
KDVSIRANVR NLFDTDYIDG GQYNMVTLGQ DRNFSVALEA KF
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