Gene Shewana3_4125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4125 
Symbol 
ID4480342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4956555 
End bp4958384 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content50% 
IMG OID639728743 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_871748 
Protein GI117922556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.513895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.539293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAA TCGTTGGCGC CGTGGCGCAA AGGGATGTGG CCGAAATTCT GGTCGAAGGT 
TTACGTCGTT TAGAATATCG TGGATATGAC TCCGCAGGTG TTGCCGTGAT CCACAATGGC
GAACTCAATC GCACTCGCCG CGTGGGTAAA GTACAGGAGC TTTCTGCCGC ACTCGAAACC
GACCCGTTAG CGGGCGGCAC TGGTATTGCT CATACTCGTT GGGCGACCCA TGGTGAGCCA
AGCGAGCGCA ATGCTCATCC ACATTTATCT GAAGGCGATA TTGCCGTGGT GCACAATGGC
ATTATCGAAA ACCATCATAA ACTGCGCGAA ATGCTTAAAG AACACGGCTA CCACTTTAGC
TCTGATACCG ACACCGAAGT GATCTGTCAT TTAGTTCACC ATGAATTGAA ATCTAACGAC
ACTTTACTGG CAGCGGTGCA AGCCACGGTA AAACAACTCG AAGGCGCTTA TGGCACTGTG
GTGATTGACC GCCGTGATAG CGAGCGTATG GTTGTGGCGC GTTCAGGTAG CCCTCTGGTG
ATTGGTTTTG GTTTAGGTGA AAACTTTGTC GCCTCTGATC AATTGGCGCT ATTGCCTGTG
ACCCGTTCTT TCGCGTTTTT AGAAGAAGGT GACGTGGCTG AAGTGACTCG TCGCACAGTG
AGCATTTTCG ATGTGCATGG CAATAAAGTT GAGCGCGAAG TTAAAGAATC TGAAATCACC
CACGATGCCG GTGACAAAGG TGAATATCGC CACTATATGC TTAAAGAGAT TTATGAGCAG
CCATTGGCAC TGACACGCAC TATCGAAGGT CGCATCGCTA ACAAGCAAGT GCTCGACACG
GCTTTTGGTG ATAATGCTGC TGAGTTCTTA AAAGATATCA AACACGTACA AATCATTGCC
TGTGGTACTA GTTACCATGC GGGTATGGCG GCGCGTTATT GGTTAGAGGA TTGGGCCGGC
GTTTCATGTA ATGTCGAAAT CGCCTCCGAA TTCCGCTACC GCAAGTCGCA TTTGTTTCCT
AACAGCCTGT TGGTGACTAT TTCTCAATCT GGCGAGACAG CCGATACGCT GGCGGCGATG
CGCCTAGCTA AAGAAATGGG TTATAAGGCG ACGCTAACAA TCTGTAACGC TCCAGGCTCT
TCCTTAGTTC GTGAGTCTGA CATGGCGTAT ATGATGAAAG CGGGCGCTGA GATTGGCGTT
GCTTCGACCA AGGCCTTTAC TGTGCAGCTG GCAGGTTTGT TAATGCTGAC GGCGGTGATC
GGTCGTCATA ATGGTATGTC TGAGCAAATG CAGGCTGAGA TCACTCAAAG CTTACAGTCT
ATGCCTGCCA AAGTGGAACA AGCCCTAGGT TTAGATGATG CGATTGCTGA ATTGGCGGAA
GACTTTGCCG ACAAACACCA TGCCTTATTC CTTGGCCGTG GCGATCAGTA CCCGATTGCG
ATGGAAGGTG CGCTCAAACT AAAAGAGATC TCCTACATCC ACGCCGAAGC CTATGCTTCT
GGCGAATTAA AGCACGGTCC ATTGGCACTG ATTGATGCCG ATATGCCAGT GATCGTGGTT
GCGCCGAACA ACGAGCTGTT AGAAAAACTC AAATCTAACG TCGAAGAAGT GCGTGCCCGT
GGCGGCTTAA TGTATGTATT TGCTGACGTG GATGCCGAGT TTGAATCTGA CGAAACCATG
AAGGTTATCC CGGTTCCACA CTGCGATATC TTTATGGCGC CGCTGATTTA CACTATCCCA
TTACAGTTGC TGTCGTATCA CGTTGCCTTA ATTAAGGGCA CCGATGTGGA TCAACCACGA
AACCTCGCTA AATCGGTGAC GGTGGAATAA
 
Protein sequence
MCGIVGAVAQ RDVAEILVEG LRRLEYRGYD SAGVAVIHNG ELNRTRRVGK VQELSAALET 
DPLAGGTGIA HTRWATHGEP SERNAHPHLS EGDIAVVHNG IIENHHKLRE MLKEHGYHFS
SDTDTEVICH LVHHELKSND TLLAAVQATV KQLEGAYGTV VIDRRDSERM VVARSGSPLV
IGFGLGENFV ASDQLALLPV TRSFAFLEEG DVAEVTRRTV SIFDVHGNKV EREVKESEIT
HDAGDKGEYR HYMLKEIYEQ PLALTRTIEG RIANKQVLDT AFGDNAAEFL KDIKHVQIIA
CGTSYHAGMA ARYWLEDWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAM
RLAKEMGYKA TLTICNAPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAVI
GRHNGMSEQM QAEITQSLQS MPAKVEQALG LDDAIAELAE DFADKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADV DAEFESDETM KVIPVPHCDI FMAPLIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE