| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4118 |
|---|
| Symbol | |
|---|
| ID | 4480332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4942062 |
|---|
| End bp | 4943867 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639728733 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871741 |
|---|
| Protein GI | 117922549 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAC TCTTTACCCC AAGCTTACTG ATTTGCGCAC TTAGTGCCTG TAGCGCGGTT
CAGCCCCCAA TCGAATCCAC CAAACAAACA ACGGTAGCCG TTGCGCAGTC CACGGCCAAG
ACTATGGCCC CAGCACTGCA AGCAATTGTG GATCAAAGTT GGCAACTCCA ACTCAGTGCC
AGCCCTGAAA TGGCCTATGG AATGGGGGAT AAGAGTGCTG CGGGTAAACT GCAAGATCTG
TCTCCCGAAG CCTTAGCTAA GCTCAATCAG GGACAAATTG CCATTCTCGC CCAATTGAAA
GCACTGGATC GCAGCAAGCT GAGTAAAGAG GATAAAATCA ACGCCCAAAT CCTCGAAGAT
CAGATCCAAA ATGAGGTCGA CCTGTATAAA TACAAGGATT ACTACCTGCC GATCACCGCA
GAGAGTGGCT TCCACGCCTA TATATCTTCC ATTGCGCAAG GGCGGTTCAA TACCCTAGAG
GATTACCAAA ACTACCTAGG TAAGCTCAAG GCACTACCGA CCTATTTTGC CCAGCAAACC
CATTGGTTAA AACAAGGCTT AAAGGAAGGC ATTACACCGC CTAAAGCCAC GCTCAAGGGA
TTTGAAAACA GCATTAGTGC TTACATCTTA CCGGTAGAGA AAAGCAGTTA TTTCAAGCCT
TTTACTCAAT ACCCAAGCCA CTTTACTGAG GCGCAAAAAG CGCAACTGAC CCAAGAAGGC
CGAGCATCGG TCGAGCAGAA TGTGCTCCCG ACCTATAAGG CTTTTTATGA TTTTATGACT
CAGGAGTATA TGCCCAACAC TCGGGAAAAT ATTGCCGCCA ACAGCTTACC CGATGGTGAT
GCCTTCTATG AGAACCGCGT TCGTTACTAC ACGACCTTAA ATATGACCTC GGCCGAAGTG
CACGAACTTG GTTTAAAAGA AGTGAAACGT ATCCGCCAGG AAATGGAGCA AGTCATTAAG
TCTGTTGGCT TTAAAGGCAG CTTTGCCGAC TTTTTACATT TCTTAAGAAC CGATCCCCAG
TTTTATACTA CTAGTGCGGA TCAGCTCCTG AAGGAAGCGG CCTTTATTGC CAAAAAAGCC
GATGCCATGC TGCCCAAATA TTTTGGTAAA TTACCACGCA AACCCTATGG TATCGCGCCA
GTGCCGGCTG AAATCGCTCC TAAATACACC TCAGGCCGTT ATTCAGGATC TAATCGTGAT
GACGAGCCGG GTTACTACTG GGTTAATACC TACGCCTTAG ATAAGCGCCC TCTCTATGAA
CTCGAAGCAC TAACGCTGCA CGAAGCGGTG CCTGGGCATC ATCTGCAGAT TTCACTCAAC
TCCGAACTGA GCTCATTGCC TGATTTTCGT CGCTACAGCT ATATTTCCGC CTTTGGTGAA
GGTTGGGGAT TGTATAGCGA ATACTTAGGC TTAGAAGCGG GATTCTATCA AGACCCATAC
AGTAACTTTG GCCGTCTAAC CTATGAGATG TGGCGCGCCG CTCGTCTCGT TGTCGATACG
GGGATGCACG CCCAAGGTTG GAGCCGAGAA CAAGCCATCG AGTTTATGGC GAGCAACACG
GCGTTATCGC TCCACAATGT GACGACTGAG ATTGACCGTT ATATTACCTG GCCAGGACAA
GCGCTCTCCT ACAAGATTGG TGAGCTCACC ATTAAACGCC TGCGCGCGAA AGCCGAGCAA
GCCTTAGGCG ATAAATTTGA TATTCGCGCC TTCCACGACG CGGTATTAGA AAATGGTTCT
GTGCCTATGT CGGTGCTAGA GCAGCAAATA AACGACTTTA TCGAAGCGCA AAAAGCCGCG
ATTTAA
|
|---|
| Protein sequence | MHKLFTPSLL ICALSACSAV QPPIESTKQT TVAVAQSTAK TMAPALQAIV DQSWQLQLSA
SPEMAYGMGD KSAAGKLQDL SPEALAKLNQ GQIAILAQLK ALDRSKLSKE DKINAQILED
QIQNEVDLYK YKDYYLPITA ESGFHAYISS IAQGRFNTLE DYQNYLGKLK ALPTYFAQQT
HWLKQGLKEG ITPPKATLKG FENSISAYIL PVEKSSYFKP FTQYPSHFTE AQKAQLTQEG
RASVEQNVLP TYKAFYDFMT QEYMPNTREN IAANSLPDGD AFYENRVRYY TTLNMTSAEV
HELGLKEVKR IRQEMEQVIK SVGFKGSFAD FLHFLRTDPQ FYTTSADQLL KEAAFIAKKA
DAMLPKYFGK LPRKPYGIAP VPAEIAPKYT SGRYSGSNRD DEPGYYWVNT YALDKRPLYE
LEALTLHEAV PGHHLQISLN SELSSLPDFR RYSYISAFGE GWGLYSEYLG LEAGFYQDPY
SNFGRLTYEM WRAARLVVDT GMHAQGWSRE QAIEFMASNT ALSLHNVTTE IDRYITWPGQ
ALSYKIGELT IKRLRAKAEQ ALGDKFDIRA FHDAVLENGS VPMSVLEQQI NDFIEAQKAA
I
|
|---|
| |