Gene Shewana3_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4113 
Symbol 
ID4480327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4937337 
End bp4937975 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID639728728 
Producthypothetical protein 
Protein accessionYP_871736 
Protein GI117922544 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.752026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAT GTTCCCTTTG TCATAGCACG CAAACACTGT TGCTCCTTCA GGACAAGAAA 
CGGTGTTTTT ATGTTTGCCA GACATGCGGG CTCACCTTTG CTGACGCAAA CAGTCATCTT
CCTCCCGCGG CAGAAAAACA GCGTTATGGT CGTTCGCGAA TTGCCGCCAA ACAGCGCCAA
CTCTCGCAAT TTATTCTACC GCTACTGACA CAAATACAAT TGCAGCAGAA AGGGAGCCTC
ACGGGCTTAA ATTTTGGACG CGTGTTAGAT CAAACCAGTC TGGCGACCAT TGAATCGGCG
GGACACACTT TCAAGCAGTA TGATCCTTTC TTCGCACCAG ACCACGAAAC GCTTAAGCAA
GAATATGATT TTATTTGTTG CTACCGAGTC TTTGAGCATT TTCAGCACCC CAGTAGAGAA
TGGAGTTTAC TGACCCGTTT ACTCAAATCG GGCGGCTGGT TAGCGATTAG CACACCCTTA
TTAATTGATT TAGAAGGGTT TGCTAAGTGG CATTATAAAA ACAATCTCAC TCACGTGAGT
TTTTACCAAA GACAAACCTT TGAATACCTA GCGAGTAATA GCGATTTTGA ACTATTATTT
GCCGCGAAAG ACCTCGTTTT GATGCAAAAA ACATCATAA
 
Protein sequence
MRRCSLCHST QTLLLLQDKK RCFYVCQTCG LTFADANSHL PPAAEKQRYG RSRIAAKQRQ 
LSQFILPLLT QIQLQQKGSL TGLNFGRVLD QTSLATIESA GHTFKQYDPF FAPDHETLKQ
EYDFICCYRV FEHFQHPSRE WSLLTRLLKS GGWLAISTPL LIDLEGFAKW HYKNNLTHVS
FYQRQTFEYL ASNSDFELLF AAKDLVLMQK TS