Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4110 |
Symbol | engB |
ID | 4480324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4935061 |
End bp | 4935720 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639728725 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_871733 |
Protein GI | 117922541 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.147474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.44318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAAT CTCATATAGA TTTTCGCAGG GCGAAGTTTT TAATCAGTGC ACCTGACATT GCACATTTGG ATCAATATCT GCCCGGCGAC GTTGGTGTTG AGATTGCTTT TGCTGGTCGC TCCAATGCCG GAAAATCGAG TGCGCTCAAT GCATTAACTG AGCAGAAAAA CTTAGCGCGT ACCAGTAAAA CCCCGGGGCG AACTCAGCTA ATTAACGTAT TTGAACTCGA TGCGCAGCGC CGATTAGTCG ATTTACCGGG TTACGGCTTT GCCCAAGTGC CTTTAGCCAT GAAATTAAAG TGGCAACAAT CCCTCGGCGA ATATTTGCAG AAGCGTGCGT GCTTAAGTGG CGTTGTGGTA TTGATGGATA TTCGTCATCC GTTGAAAGAT TTGGATATGC AGATGATCGA ATGGGCGGTT GCGAGTGAAA TTCCAGTACT CGCATTACTG ACTAAGTCCG ATAAATTGGC GCAAAGCGCG AAGATGAAAA CCGTGAACGA AGTGCGTAAA GCGCTGGTTG AATTTGGTGA TTGGGTACAG GTTGAGCCTT TTTCTGCGCT CAAAGGCACG GGCAAACCTA AAGTGCTGAG TATTCTAAAT GAATGGTGTC ATCCGCAATG GTTGGCCGAT GAGTTAGAAA ACCAAGACGA CGCCGAGTAA
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Protein sequence | MTESHIDFRR AKFLISAPDI AHLDQYLPGD VGVEIAFAGR SNAGKSSALN ALTEQKNLAR TSKTPGRTQL INVFELDAQR RLVDLPGYGF AQVPLAMKLK WQQSLGEYLQ KRACLSGVVV LMDIRHPLKD LDMQMIEWAV ASEIPVLALL TKSDKLAQSA KMKTVNEVRK ALVEFGDWVQ VEPFSALKGT GKPKVLSILN EWCHPQWLAD ELENQDDAE
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