| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4109 |
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| Symbol | |
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| ID | 4480323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4931315 |
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| End bp | 4934083 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639728724 |
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| Product | DNA polymerase I |
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| Protein accession | YP_871732 |
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| Protein GI | 117922540 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000411128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.224079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACCA TAGCCAATAA CCCACTTGTC CTTGTGGATG GATCTTCTTA TTTATATCGC
GCCTATTATG CGCCTCCTCA CCTGACAAAC TCAAAGGGCG AAGCTACTGG TGCTGTTTAT
GGCGTAGTGA ATATGCTCCG CAGCTTATTA AGCCGTTATC AACCTAGCCA TATCGCTGTG
GTGTTCGATG CTAAAGGCAA AACCTTCCGC AATGACTTAT ATGAAGAATA CAAGGCACAT
CGCCCGCCTA TGCCGGATGA CCTGCGCTCA CAAATTGAGC CACTACACCG TATTATCCGT
GCCTTAGGCC TGCCCTTAAT CTCTATTCCT GGTGTTGAGG CGGACGATGT TATCGGCACA
ATCGCTCGCC AAGCGAGCCG CGAAAACCGC GCTGTACTCA TCAGCACTGG TGATAAAGAC
ATGGCGCAGC TGGTTGATGA AAATATCACG CTGATCAACA CCATGACAGA TACCATTATG
GGCCCTGAAG AAGTTGCGGC TAAATATGGT GTAGGTCCAG ACAGAATTAT CGATTTCTTA
GCGCTGATGG GCGATAAGGC GGATAACATT CCCGGTTTAC CTGGTGTTGG CGAAAAAACC
GCATTAGCTA TGCTCACGGG GGCGGGTAGT GTCGCCAATT TGCTTGCAGA GCCCGAAAAA
GTAACCGAAT TAGGCTTTAG GGGCGCAAAA ACCATGGCGG CGAAAATCAT CGACAATGCC
GACATGCTAA AGCTGTCCTA TGAGCTTGCC ACCATTAAAA CCGATGTTGA ACTCGAACAA
GATTGGCATG AGCTCACCGC CAAACCCGCT GACAGGGACG AACTGATCAA ATGCTACGGC
GAGATGGAGT TTAAACGCTG GCTTGCCGAA GTCTTAGATA ATAAGGCGCC AGCGACGGTC
GCAGCAAAAG CCGAAACAAC AGAGACCCAA GAAGAGTCAG CGCCCAGCGT CACGATTGAA
ACCCAATACG ATACAATTCT GACCGAAGCT CAGCTTGATG AGTGGATTGC CAAACTCAAA
CAAGCGCCAT TAATGGCCGT AGATACCGAG ACCACCAGCC TCGACTATAT GGTTGCGGAA
TTGGTTGGCC TGTCCTTTGC TGTTGAAGCG GGTAAAGCCG CCTATCTGCC CTTAGCCCAC
GATTATGTTG GCGCACCTCA ACAATTAGAT AAGCAGACTG CACTCGAAAA ACTGCGCCCC
TTACTCGAAG ATGCCAAGAT TAAAAAAGTC GGTCAAAATC TGAAATATGA CATCAGCGTA
TTAGCCAATG CAGGCATAAA ACTCCAAGGC GTGGTATTCG ACACTATGCT CGAATCCTAT
GTGTTTAACT CGATCGCCTC ACGCCATGAT ATGGATGGGT TGGCGCTAAA ATATCTGGGC
CATAAAAATA TCGCCTTTGA AGATATCGCA GGTAAAGGTG CTAAACAGCT GACCTTCAAC
CAAATTCCGT TGGAAACAGC TGCGCCCTAT GCGGCGGAAG ATGCCGATAT TACCCTACGT
CTACATCAAC ATTTGTGGCC AAGACTCGAA AAAGAGACCG AATTAGCCTC GGTCTTTACC
GATATTGAAC TGCCGCTGAT CCAAATACTG TCCGATATTG AACGCCAAGG TGTGTTTATC
GATAGTATGT TGCTCGGCCA ACAGAGTGAT GAACTTGCCC GCAAAATCGA TGAGTTAGAA
ACAAAAGCTT ATGATATTGC AGGTGAAAAA TTCAATTTAA GCTCACCAAA GCAACTACAA
GTGCTGTTTT TTGAAAAGCT GGGTTATCCG GTCATCAAAA AAACCCCTAA GGGCGCCCCC
TCTACCGCGG AAGAAGTACT GGTTGAGTTG GCATTGGATT TCCCTCTGCC TAAAGTGATC
CTTGAACATA GAAGCCTAAC CAAGCTAAAG AGTACTTACA CCGACAAGCT CCCTCTAATG
GTGAACGCGA AAACGGGTCG GGTACACACA AGCTACCATC AGGCCAACGC CGCAACGGGG
CGTTTGTCCT CGAGCGAACC AAACCTACAG AATATTCCTA TCCGCACCGA GGAAGGTCGT
CGTATTCGCC AAGCCTTTAT TGCGCCGCAG GGACGTAAGA TTTTGGCCGC CGACTATTCG
CAGATTGAAT TACGCATCAT GGCGCATTTA TCCCAAGATG CGGGCTTACT TAAAGCCTTC
GCCGAAGGTA AAGACATTCA CAGAGCCACC GCCGCCGAAG TATTTGGCAC CGACTTTGAC
AGTGTCACCT CGGAGCAGCG TCGCCGCGCC AAAGCCGTTA ACTTTGGCCT TATCTATGGC
ATGTCCGCCT TTGGATTGGC GCGTCAGCTC GATATTCCCC GCAACGAGGC ACAAACTTAC
ATCGACACTT ACTTCGCCCG CTATCCAGGC GTATTAAGGT ATATGGAAGA AACACGAGCC
AGTGCAGCAG AACTTGGCTA TGTCTCTACG CTATTTGGGC GCCGTCTCTA TTTACCTGAA
ATTCGCGATC GTAATGCAAT GCGCCGCCAA GCAGCAGAAA GAGCCGCGAT TAACGCCCCA
ATGCAAGGCA CCGCCGCGGA TATTATTAAA AAAGCCATGA TCAGCATTGC CGATTGGATA
AAAACCGATA CCCAAGGTGA AATCGCCATG ATCATGCAAG TCCACGACGA ATTAGTATTC
GAAGTCGATG CCGATAAAGC CGAAACACTC AAGCTCAAGG TGTGTGAACT CATGGCAAAA
GCAGCCAATC TGGACGTGGA ACTTCTGGCA GAAGCTGGTA TTGGCGATAA CTGGGATCAA
GCCCACTAG
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| Protein sequence | MPTIANNPLV LVDGSSYLYR AYYAPPHLTN SKGEATGAVY GVVNMLRSLL SRYQPSHIAV
VFDAKGKTFR NDLYEEYKAH RPPMPDDLRS QIEPLHRIIR ALGLPLISIP GVEADDVIGT
IARQASRENR AVLISTGDKD MAQLVDENIT LINTMTDTIM GPEEVAAKYG VGPDRIIDFL
ALMGDKADNI PGLPGVGEKT ALAMLTGAGS VANLLAEPEK VTELGFRGAK TMAAKIIDNA
DMLKLSYELA TIKTDVELEQ DWHELTAKPA DRDELIKCYG EMEFKRWLAE VLDNKAPATV
AAKAETTETQ EESAPSVTIE TQYDTILTEA QLDEWIAKLK QAPLMAVDTE TTSLDYMVAE
LVGLSFAVEA GKAAYLPLAH DYVGAPQQLD KQTALEKLRP LLEDAKIKKV GQNLKYDISV
LANAGIKLQG VVFDTMLESY VFNSIASRHD MDGLALKYLG HKNIAFEDIA GKGAKQLTFN
QIPLETAAPY AAEDADITLR LHQHLWPRLE KETELASVFT DIELPLIQIL SDIERQGVFI
DSMLLGQQSD ELARKIDELE TKAYDIAGEK FNLSSPKQLQ VLFFEKLGYP VIKKTPKGAP
STAEEVLVEL ALDFPLPKVI LEHRSLTKLK STYTDKLPLM VNAKTGRVHT SYHQANAATG
RLSSSEPNLQ NIPIRTEEGR RIRQAFIAPQ GRKILAADYS QIELRIMAHL SQDAGLLKAF
AEGKDIHRAT AAEVFGTDFD SVTSEQRRRA KAVNFGLIYG MSAFGLARQL DIPRNEAQTY
IDTYFARYPG VLRYMEETRA SAAELGYVST LFGRRLYLPE IRDRNAMRRQ AAERAAINAP
MQGTAADIIK KAMISIADWI KTDTQGEIAM IMQVHDELVF EVDADKAETL KLKVCELMAK
AANLDVELLA EAGIGDNWDQ AH
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