Gene Shewana3_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4106 
Symbol 
ID4480320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4929052 
End bp4929357 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content45% 
IMG OID639728721 
Productrhodanese domain-containing protein 
Protein accessionYP_871729 
Protein GI117922537 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000617215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.479241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCT TTAAACACCT TAGCGTTAAT CAATTAGTGC AAATGACCGA GTCAAAGCCA 
GTGCAAATCG TCGATATTCG CGATGGTCAC AGCTTTAACA ACGGCCACAT TGATGGCGCA
TTTAATTTGA ATAACGAGAA TCTGGCGCAC TTTATTGGCC AAGCGGATAT GGATAGTCCT
TTAGTGGTGG TTTGCTACCA TGGCATCAGC AGCCAAAATG CCGCGCAATA TCTGTGTGAA
CAAGGCTTTG ATGATGTCTA TAGCCTAGAT GGTGGCTTTA GCGCTTGGCA TGAGGCCAAT
GCATGA
 
Protein sequence
MSSFKHLSVN QLVQMTESKP VQIVDIRDGH SFNNGHIDGA FNLNNENLAH FIGQADMDSP 
LVVVCYHGIS SQNAAQYLCE QGFDDVYSLD GGFSAWHEAN A