Gene Shewana3_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4087 
Symbol 
ID4480301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4909896 
End bp4910627 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID639728702 
Productglycosyl transferase family protein 
Protein accessionYP_871710 
Protein GI117922518 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTCAG TCGTGATCCC CGCCAAAGAT GAAGTGGGCA ATATTGGCCC ATTAATGAAA 
GAGATATGCC AAGCCCTGCA AGGGGTGACT GAGTTTGAAA TTCTTGTTGT CGACGACGGT
AGTCAGGATG ACACTTTTGG TGAAGTTATG CACACCGCAG AGGTGATGCA ATGCGATGCT
AAAGCCATTC GTCACGAGCG CAGTACGGGC CAGAGTACCG CTATTTCCAC TGGCGTTTTA
CATGCCCGCG GTAAATACAT TGTCACCTTA GATGCTGACG GGCAAAACGA CCCTGCGGAT
ATTCCCGCCA TGTTGGCCCA ATTGCCGCAA ATTCATGCCG AACACTTTTG TATTGCCGGT
TATCGCAAAA ACCGTAAAGA CACGGCGTGG AAGCGATTCC AGTCCCGCTT TGCGAATAAA
GTGCGTGATG CACTGTTACA CGATGGCGTG CCTGATACCG GATGTGGCTT AAAACTCTTC
CCCCGCGAAA CCTTCCTGCG CATGCCTTAC TTCGACCATA TGCACAGATA TATCCCGGCA
CTCGTGCGCC GCATGGGGGG CGAAGTGTTT ATTTCTGTGG TTAATCATAG GGATCGCCAA
GTCGGCGTGT CTAAATATAC CGCTTGGAAT CGGGTCTGGG TCGGAATTGT CGACATCATG
GGCGTCATGT GGCTCGGTCG TAGGGCGAAA ATCGCTAAGG TCGCCCGTAG CGAAACCAGC
TGGCACGATT AA
 
Protein sequence
MISVVIPAKD EVGNIGPLMK EICQALQGVT EFEILVVDDG SQDDTFGEVM HTAEVMQCDA 
KAIRHERSTG QSTAISTGVL HARGKYIVTL DADGQNDPAD IPAMLAQLPQ IHAEHFCIAG
YRKNRKDTAW KRFQSRFANK VRDALLHDGV PDTGCGLKLF PRETFLRMPY FDHMHRYIPA
LVRRMGGEVF ISVVNHRDRQ VGVSKYTAWN RVWVGIVDIM GVMWLGRRAK IAKVARSETS
WHD