Gene Shewana3_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4086 
Symbol 
ID4480300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4909235 
End bp4909894 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content49% 
IMG OID639728701 
Producthypothetical protein 
Protein accessionYP_871709 
Protein GI117922517 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAC TCTATAAGGC GATTTTTATC GTCTTTATTT TGCTGGTGTT AATGTTTGCG 
GCCCAGCAAG GGTTATTCGA GCATGTGACC GATAGCAATT GGGTAGCACA CTTTATTGCC
GCTCAAGGGG CTTATGCGCT GGCGGTATTG CTGATGGTTG GCGCCTTGTT TACTGCTGTA
GGTGGGCCGA GGCAGGTGAT CGCCTTTGTA TTCGGCTTTG CCCTCGGTGG CATCTATGGT
GGCTTATTTT CCACCTTAGC GGCATTGCTG GGTTGTGTGC TGGCGTTTTA TACCGCGAGA
TTAACCATTC GAAACAGTCT GCAACGACGT TTTGGCAATC GTTTACAAAA GTTTGAGGCG
CTGATCATTC AGCGGACTTG GTTAAAAGTC TTAATGATCC GTCTGTTGCC CGTGGGTAGT
AATCTGCTGA CGAATCTGTT TGCGGGTGCT ACACACATCC CCGCTGGTGG ATTTATGTTT
GGCAGCGTGT TGGGTTATTT GCCGCAGATG CTGATATTCA GTTTTGCGGG CGCGGGCATT
GGCTTATCTG ATCATAACCA ACTGGGGATC AGTATCGGGC TGTTTATTAT CTCGAGTCTT
ATCGGCGCTT ACCTTTACCG TTCTAGCCTG CGTAAGCAGG TGGATGAATT GGAAAACTAA
 
Protein sequence
MKRLYKAIFI VFILLVLMFA AQQGLFEHVT DSNWVAHFIA AQGAYALAVL LMVGALFTAV 
GGPRQVIAFV FGFALGGIYG GLFSTLAALL GCVLAFYTAR LTIRNSLQRR FGNRLQKFEA
LIIQRTWLKV LMIRLLPVGS NLLTNLFAGA THIPAGGFMF GSVLGYLPQM LIFSFAGAGI
GLSDHNQLGI SIGLFIISSL IGAYLYRSSL RKQVDELEN