Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4086 |
Symbol | |
ID | 4480300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4909235 |
End bp | 4909894 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639728701 |
Product | hypothetical protein |
Protein accession | YP_871709 |
Protein GI | 117922517 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAC TCTATAAGGC GATTTTTATC GTCTTTATTT TGCTGGTGTT AATGTTTGCG GCCCAGCAAG GGTTATTCGA GCATGTGACC GATAGCAATT GGGTAGCACA CTTTATTGCC GCTCAAGGGG CTTATGCGCT GGCGGTATTG CTGATGGTTG GCGCCTTGTT TACTGCTGTA GGTGGGCCGA GGCAGGTGAT CGCCTTTGTA TTCGGCTTTG CCCTCGGTGG CATCTATGGT GGCTTATTTT CCACCTTAGC GGCATTGCTG GGTTGTGTGC TGGCGTTTTA TACCGCGAGA TTAACCATTC GAAACAGTCT GCAACGACGT TTTGGCAATC GTTTACAAAA GTTTGAGGCG CTGATCATTC AGCGGACTTG GTTAAAAGTC TTAATGATCC GTCTGTTGCC CGTGGGTAGT AATCTGCTGA CGAATCTGTT TGCGGGTGCT ACACACATCC CCGCTGGTGG ATTTATGTTT GGCAGCGTGT TGGGTTATTT GCCGCAGATG CTGATATTCA GTTTTGCGGG CGCGGGCATT GGCTTATCTG ATCATAACCA ACTGGGGATC AGTATCGGGC TGTTTATTAT CTCGAGTCTT ATCGGCGCTT ACCTTTACCG TTCTAGCCTG CGTAAGCAGG TGGATGAATT GGAAAACTAA
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Protein sequence | MKRLYKAIFI VFILLVLMFA AQQGLFEHVT DSNWVAHFIA AQGAYALAVL LMVGALFTAV GGPRQVIAFV FGFALGGIYG GLFSTLAALL GCVLAFYTAR LTIRNSLQRR FGNRLQKFEA LIIQRTWLKV LMIRLLPVGS NLLTNLFAGA THIPAGGFMF GSVLGYLPQM LIFSFAGAGI GLSDHNQLGI SIGLFIISSL IGAYLYRSSL RKQVDELEN
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