Gene Shewana3_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4079 
Symbol 
ID4480293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4901944 
End bp4902651 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID639728694 
ProductABC transporter related 
Protein accessionYP_871702 
Protein GI117922510 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CCAAACTGAT CGCCCGTGAC TTGGAAATGT CCTTTGGCCC GCGCTTATTA 
TTCAAAGCCC ATAGCCTAGA GTTGTGCCAA GGGAACGTCA TTTATTTGCA GGGTGACAAC
GGCTCGGGCA AGTCGACCCT GATGAAGATC CTCGCGGGTT TACAGCCGCC ATCTAAGGGC
AAGATTGAAG TCAGCGGCTT TAAAAAGGAT GCATGGTGGA CACGCAATCC TTTGCTGGGC
AAAGCCGTTT ACCTCCACCA GCATCCCTAT CTATTCGATG GTACAGTCAA TTACAACCTG
ACCTACGGTT TACCCTTTGC GGCCTCAAAA ACCGAAGCCA AACGTAGAAT TGGTCAAGCA
ATTGAGATGG CGCAACTAGG CTCGCTATTG CAAGCCAGAG CCAGCAATTT ATCCGGCGGC
GAAAGGCAAC GCCTCGCCAT CGCCCGCGCT TGGATATTGC AGCCAAAGTT ACTGATGCTC
GATGAGCCGA CCTCCAACAT GGATAAAGAC TCCCAAGCCT TAGTGCTGCA AATGATCCAG
CAGCTCAAAC AGCAAGGGAC GGGAATGCTC TTAAGCAGCC ACCAAAACTG TGCGCTCACC
GCCATTTGCG AGCAGCAGTG GCACATTGAA GACCAACAGG TGATAACCTC CCGTCAGCAA
ACGCCCACAA ACTCCACACA GGGATCTTTA TATGTCGTTG CAAATTGA
 
Protein sequence
MTQAKLIARD LEMSFGPRLL FKAHSLELCQ GNVIYLQGDN GSGKSTLMKI LAGLQPPSKG 
KIEVSGFKKD AWWTRNPLLG KAVYLHQHPY LFDGTVNYNL TYGLPFAASK TEAKRRIGQA
IEMAQLGSLL QARASNLSGG ERQRLAIARA WILQPKLLML DEPTSNMDKD SQALVLQMIQ
QLKQQGTGML LSSHQNCALT AICEQQWHIE DQQVITSRQQ TPTNSTQGSL YVVAN