Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4075 |
Symbol | |
ID | 4480289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4896609 |
End bp | 4898744 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728690 |
Product | ATPase domain-containing protein |
Protein accession | YP_871698 |
Protein GI | 117922506 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00205283 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGTTTT TTACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAAGTGCGT TATCGCATTC TGATCCTCAC CTTGCTGCCG ATTTTGCTCA CCTTGGTGAG TTTAGTGTTT ATCACTATTT ACTGGAATAT CAGTTACACA GGCAAGCAAC TGTTTATGAA AGTAAAAGCC GATCTGGCTG TGGCTGAAAA TACCCTGCAA CAGGTGCAAG TTCGTCAGGA GAAACAGCTC GAGAGAGTCA TGACCTCATG GACTTTTCAA AATGATTTTC GGCCCATTCT CACTGGCGAG TTGGCACACA GGGCGAGTAT AGATGCCTTT CTAAATGAGC AAAAAAAGCA ACTCGATCTG GATTTTCTAA GGCTTGTCAG TGTGGCCGAG GCCGCGTCAG ACCCGGATTT GCGACAAATT TTACCGAAAA TGGGTGGTCT CTTGCCCTAT TCGGGGCTGA TGGTGTTATC GCCTGAACGT TTGGCGCGGG TTGATCCGGA TTTAGCTCAA AGGGCGGCGA TTCCCTTACT AGCGACACTG CGGGCGCAAA GCCCGAATAA ACAAGTGGAA GACCGTGGTC TACTGAGCCG CAGTTTGCTG CCGATCCCCG ATTTTGAGGG CAAAGTGGCT TGGTATCTCG ATGGCGGCGT GCTGTTTAAT CGGGATACGC GCATCGTCGA CCATATCCGC GACCTCGTCT ACGACAAGGG CACGCTGCCG GAGCGTTCTA TCGGCACTGT GACCATCTTC CTCGATAATA TTCGTGTCTC AACCAACGTG CCTTTGCATT TTTTCCCGCA GTCGAATGAA TCCCAAGGGC GGGCGCTCGG CAGTTTAGTG TCGGAGGAAG TGCGCGAAAA AGTGCTGAAT CACGGTGAGT TATGGGTCGA TCGCGCCTTT GTGTTTAACG ATTGGTTTAT TTCCGCCTAT GCGCCTTTAG AAGATATCCG TGGGCAACGT GTTGGCATGA TCTATACCGG ATTCTCTGAG TCGCCCTTTA TTCATAACTA CCTGCTTAAT ATCATTGAGT TAGGCACGAT TCTGATGCTG GTGCTGCTAA TCTCCGGCTT ATTGGTTTAT CGCGGTGCTT ACAGCTTGTT GCAACCGATT GAGCGTATTC ACCATGTGGT GCAAGCGGTG CAGTCTGGTC GCAATGTGCG TATTGGCGCC TTGGGGCTGG ACAGGGATAA CGAATTGTCG AATCTTGCCG AGCAGTTCGA TCGTATGCTC GATTTATTGC AGCGGCGCAA CGCGCAAATC CAAGCCGCCG CCGAACAACT CGAGATGAAG GTCGAGGAGC GGACTCGTAG CCTGCAGGAT AAGACCTTAG AGTTGCAGCG CAACGTGGCG CTACTCAATG AAACTCGCCA GCAGTTAGTG ACCAATGAAA AGTTAACCGC GCTGGGTGAG CTTACTGCTG GGATTGCCCA TGAGATCAAT AATCCAACGG CGGTGATCCT CGGTAATATG GAGCTGCTGC GTTATGAGCT TGGAGATAAT GCCGAGTCGG TAAAAGAAGA AATCGACCTT GTTATCCAAC AGGTTGGCCG TATTAGCACT ATTATCCGCA GCCTGCTGCA ATACAGTCGC CCTGGTGAGT TTAACGCTCC CTTAGAGATG CATCCTATTA CGCCTATCAT CGAGGAAATG CTGGTATTAG TGCGGCACTC GATTCAGAAA CAAGAAGTGG TGCTGATAAC TGAACTGAAC GCCAGCTGCC CTGTGCAGGT TAATCGCCCG CAGTTGCTGC AAGTGCTGAT TAACCTTGTG GTTAACGCCG CCCATGCGAT GGACGGTAAG GGCAGGATTT GGGTGCGAAC CTATGATTGG CTACAGCAAG ATATGCCGAT TGGGGTGAAA ATTGAGGTTG AGGACGAAGG TTCGGGGATT GCGCCTGAGC AACTAGGGCG GATTTTTGAT CCCTTCTACA CCACGCGTAA AGACGGCACA GGCCTTGGAT TATCCTTAAG TTACGGCATT ATCAAGCGTA TCGGTGGCAC CATAGAGGTG AGTTCTGTAC TGGGTAAGGG GTCTATCTTC ACTATTGGTT TGTACCATGA GGCGAAGGAA GATCAGCAAA ACAACCCCTA CGATGGCTTA CATTTTTCCG GCCAAAGCAC CGAAATGTCA TCTTAA
|
Protein sequence | MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA DLAVAENTLQ QVQVRQEKQL ERVMTSWTFQ NDFRPILTGE LAHRASIDAF LNEQKKQLDL DFLRLVSVAE AASDPDLRQI LPKMGGLLPY SGLMVLSPER LARVDPDLAQ RAAIPLLATL RAQSPNKQVE DRGLLSRSLL PIPDFEGKVA WYLDGGVLFN RDTRIVDHIR DLVYDKGTLP ERSIGTVTIF LDNIRVSTNV PLHFFPQSNE SQGRALGSLV SEEVREKVLN HGELWVDRAF VFNDWFISAY APLEDIRGQR VGMIYTGFSE SPFIHNYLLN IIELGTILML VLLISGLLVY RGAYSLLQPI ERIHHVVQAV QSGRNVRIGA LGLDRDNELS NLAEQFDRML DLLQRRNAQI QAAAEQLEMK VEERTRSLQD KTLELQRNVA LLNETRQQLV TNEKLTALGE LTAGIAHEIN NPTAVILGNM ELLRYELGDN AESVKEEIDL VIQQVGRIST IIRSLLQYSR PGEFNAPLEM HPITPIIEEM LVLVRHSIQK QEVVLITELN ASCPVQVNRP QLLQVLINLV VNAAHAMDGK GRIWVRTYDW LQQDMPIGVK IEVEDEGSGI APEQLGRIFD PFYTTRKDGT GLGLSLSYGI IKRIGGTIEV SSVLGKGSIF TIGLYHEAKE DQQNNPYDGL HFSGQSTEMS S
|
| |