Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4072 |
Symbol | |
ID | 4480286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4894159 |
End bp | 4894884 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639728687 |
Product | hypothetical protein |
Protein accession | YP_871695 |
Protein GI | 117922503 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00123999 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATCAT TTCTTGCGGC CTTGTGTTTT AGTTTATTGA GTGTGTGTTC CTACGCGACA CCGGCTAAAC CCGTGGTAAT TCATCTGGTC ACCGCTTCGT GGCTAGGTTT CTCCAATCCC GACGAAACGG GTTATTACTT CGATATTCTC CGCAAGGCGT TTCCTGCTCC CGATTGGCAA CTCGATGTGC AGTTTATGCC CTTTGCCCGC ACGCTTTATA TGGTTGAAAC TAGCAGAGTG GATATGATCC TCAGTGTTTA CAAGGGGGAT GTGAAAAACA GCCTACTGAG TGAAAACCCC GTTGAACTTG ATTCTATCGA TGCCGCAGTT ACCCCACAAA TTGCGGCGAC TTGGTCGGGG ATGGAGAGCT TATCTCACAA GAAAGTGCAG GCCATGCTGG CCTATCGCTA TAACATGCTG ACGACGATCC CGATGTTTTA TGAGGAAGGC AGCGACATCT TAAGCATGCT AAATAGTGTG AATGCGGGAC GAACCGATGC CGTGCTGGAT TACAGGAAGA ATATGGAGAC TCTCGTCCCT CAATTGAAGG CGCCGCAGCA GTTTGTGATT ATTCCTGGAG TGCTCACCGC CGAAACCTAT TTCGCCTTTG CCAATACGGA AAAAGGGCGG ATGCTAAAGC AACATTTTGA TATTGAGCAT AAAAAGCTGA TTGATTCCGG TGAGCAAGAA CGACTTTATG CAGAGACAAA AGCAAAAGGA TTTTAG
|
Protein sequence | MRSFLAALCF SLLSVCSYAT PAKPVVIHLV TASWLGFSNP DETGYYFDIL RKAFPAPDWQ LDVQFMPFAR TLYMVETSRV DMILSVYKGD VKNSLLSENP VELDSIDAAV TPQIAATWSG MESLSHKKVQ AMLAYRYNML TTIPMFYEEG SDILSMLNSV NAGRTDAVLD YRKNMETLVP QLKAPQQFVI IPGVLTAETY FAFANTEKGR MLKQHFDIEH KKLIDSGEQE RLYAETKAKG F
|
| |