Gene Shewana3_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4056 
Symbol 
ID4480270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4873963 
End bp4875069 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID639728671 
Productgamma-glutamyl kinase 
Protein accessionYP_871679 
Protein GI117922487 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACT CTCCCCGTAA ACGTATCGTC GTCAAAGTGG GGAGCGCCTT AATCGCGCCC 
CACAAGCAAG GTTGCAGTAG TCATTATCTC TTGGGGATCG CGCAGTTTAT TACTTATTGC
CGTGTCCAAG GTATTCAAGT GGTATTGGTT TCATCCGGCT CGGTTGCCGC TGGGTGGCAT
CATTTTGAGG GCCAAGCTCA GCCGAGTGTC ACGGTCAAAA AGGCCATGGC GGCCGCGGGT
CAGGCGGATA TGATGGCGAC GTGGAATAAG CTATTTGATT TTCCTACCGC CCAACTGCTG
CTGACCCATG GCGACTTACG TAATCGCGAG CGTTATATCA GTATTCGAGA CACTATTTTT
AGCCTGCTCG AACACGGTTT AATGCCGATT ATCAATGAGA ATGACGCCGT GACCGCCGAC
AAACTCAAGG TTGGCGATAA CGATAATCTC TCGGCCATGG TGGCGGCTGC GGCCGATGCC
GACACCTTAG TGATTTGCTC GGATGTGGAT GGACTCTACG ATCAAAATCC CCACGAGCAT
CCCAATGCCA AGTTGATAAA GCAAGTCACT GAAATCAATG CCGATATCTA TGCCATGGCG
GGAGGCGTCA GCAGCGATGT TGGCACCGGA GGCATGCGCA CTAAGATCCA AGCCGCCGAG
AAAGCCATCT CCCACGGCAT TGAGACCTTT ATTATCAATG GCTTTAATGC CGATTCCTTT
AGCCAACTGC TAAAGGGGCA AAATCCGGGC ACCCTCTTTA CCCCCTACGA AAAACCGATG
CAGGAACATT TGCATTGGAT GACCCACACC TCGCAAGCGC AGGGCGAAGT GATCGTCGAG
GATGATTTTG ACCTAGCACT CGATCAGCAC AGCGAGCAAT TAACTAGCGA TGATGTGGTT
GAAGTCAAAG GGGATTTCTC AGTGGGCGAC ACCATTCTGG TGCGTAAAGG CGATGGCACT
AAGTTGGCGA AAGCCAAATC TAACTACAGC AGTTGCCTAC TGAGTTTTAT TACCGAGCAG
GATGATCAGG CGTTTGCCAG TGAGTTCCAA CAAAAAACTG GCCCCATCAT TTCCGATAAG
AATATCGCCA TTCTTAAATC CATTTGA
 
Protein sequence
MTDSPRKRIV VKVGSALIAP HKQGCSSHYL LGIAQFITYC RVQGIQVVLV SSGSVAAGWH 
HFEGQAQPSV TVKKAMAAAG QADMMATWNK LFDFPTAQLL LTHGDLRNRE RYISIRDTIF
SLLEHGLMPI INENDAVTAD KLKVGDNDNL SAMVAAAADA DTLVICSDVD GLYDQNPHEH
PNAKLIKQVT EINADIYAMA GGVSSDVGTG GMRTKIQAAE KAISHGIETF IINGFNADSF
SQLLKGQNPG TLFTPYEKPM QEHLHWMTHT SQAQGEVIVE DDFDLALDQH SEQLTSDDVV
EVKGDFSVGD TILVRKGDGT KLAKAKSNYS SCLLSFITEQ DDQAFASEFQ QKTGPIISDK
NIAILKSI