Gene Shewana3_4050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4050 
Symbol 
ID4480264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4866065 
End bp4866595 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID639728665 
Producthypothetical protein 
Protein accessionYP_871673 
Protein GI117922481 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGT ATTTCCGTTT GTTTTGGTTG TTGTTTTGGC GCACGCGTCA CTGCCGTAAG 
ATTGATTTTT TGGGCACGAG CCGTATTACT TACCGGGCAT TGCCTAGCGA TTGCGATATC
AACTTCCACC TGACCAACTC CCGCTATCCG GCGTTTATGG ATCTGGCGCG CACTTATATG
TTGGCCGAAA TGGGGTTGTT GAAGCGTTTC CTCAAATTGA AGTGGATGCC GATTGTTAAC
GCCGCCGAAT TTACCTATAT CCGCGATATC AAGCCCCTGA AAAAGTTTGA GATTGAAACC
AAGGTCGTGG GCTGGGATGA GAAATATTTT TATATTGAAC AACGCTTTGT GAGCGAACGC
GGCTTGCACT GCATAGTGCA TGTGCGTGGT GTGTTTGTCT GTAAAGGTAA GCAAGTCCCG
CTAGATGTGT TAGTCAAAGA GGCGGGTTAT ACCGATCCTG CTCCTGAGTT GCCGCCAGAA
GTCATTAAAT GGAAAGCGTT TTTACAGTTG AAGAAAGAAC GCAATCGCTA G
 
Protein sequence
MNLYFRLFWL LFWRTRHCRK IDFLGTSRIT YRALPSDCDI NFHLTNSRYP AFMDLARTYM 
LAEMGLLKRF LKLKWMPIVN AAEFTYIRDI KPLKKFEIET KVVGWDEKYF YIEQRFVSER
GLHCIVHVRG VFVCKGKQVP LDVLVKEAGY TDPAPELPPE VIKWKAFLQL KKERNR