Gene Shewana3_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4048 
Symbol 
ID4480262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4864248 
End bp4864937 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content52% 
IMG OID639728663 
Product3-methyladenine DNA glycosylase 
Protein accessionYP_871671 
Protein GI117922479 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT TAGAAAGTTT CTCATCCATC TATGCCAGAG CGAGTGAGCG CAAGGGCGGT 
AAAAAGGGGC TCGAAGCATT GTTGCCAAGC TGCCTGACCA GTGCCGAAAT TCGCCAGTAT
GATGATGCCA CGCTGCTCTC CGCCATGAGT CGGCAGGTAT TTCAGAGTGG CTTTGTCTGG
CGTGTGGTCG ATAATAAGTG GCCCGCCTAT GAGAAGTCTT TCTTTCATTT CGTGCCTGAA
AAGGTATTGA TGTTGTCGCC CGAGCAGATC CAAACCCGCG CCGCGGATGC GACCTTAATT
CGCCATTTAA AGAAGACCCA AGCGATTTAT GATAATGCCT TGATGATCCA TGATATCGCC
CGCGAACATG GCAGCTTGGC TAAGCTGATT GCCGACTGGC CGACCGAAGA TATCGTCGGG
CTTTGGGCAC TCTTAAAGAA ACGCGGCGCT CGCCTCGGCG GCAATACTGG ACCGTATTTC
CTGCGCGGCA TTGGTAAGGA TACCTTCTTG TTAACCGATG ATGTGCAAGG TTATTTTAAG
GCGCATAAGT TGGTGGATGC CGGTTTTAGC TCGCAAACGG CGCTAAAGCA GGTGCAGGCC
GCTTTCAATC AATGGCAGCA AGAATCGGGT CGGTGTCTTG CGGATATTAG CCGGGTCTTA
GCCTGTAGCT TGGGTGATAA TCGTATTTAG
 
Protein sequence
MSQLESFSSI YARASERKGG KKGLEALLPS CLTSAEIRQY DDATLLSAMS RQVFQSGFVW 
RVVDNKWPAY EKSFFHFVPE KVLMLSPEQI QTRAADATLI RHLKKTQAIY DNALMIHDIA
REHGSLAKLI ADWPTEDIVG LWALLKKRGA RLGGNTGPYF LRGIGKDTFL LTDDVQGYFK
AHKLVDAGFS SQTALKQVQA AFNQWQQESG RCLADISRVL ACSLGDNRI