Gene Shewana3_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4047 
Symbol 
ID4480261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4863399 
End bp4864145 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content48% 
IMG OID639728662 
Producthypothetical protein 
Protein accessionYP_871670 
Protein GI117922478 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTA TGAAGACTCG TACTAAATTT TTGCTGACAG GGGCGTTGCT TTCTTTGGCG 
GCAAGCTCCC ACGGCGCCGA AGATAATCAA CTCTTTGGCG GCACCATTAA CGGCAACCTT
AACTTTGCAT CCGACTATGT GTTTCGTGGT GAATCAGAAA CCTTAGACGG CGATATTCCC
GTCGTACAAG GCACCCTGAG CTGGAATCAC AACCAAGGTT GGTATGCGGG GGTATTTAGC
TCCAACATCA AATTTGCCGA CCCTAACTTA GAAATCGTTA CTGCACCTTT TATTGGTAAA
GCGGGGGAAT TTGGCGACTC AGGTTTTACC TATGATGTGA TGTTGTTTTC ATACCTCTAC
CCAGGTGCGT CCTACTCCAA CTACACCGAG TTATGGTTAA AAGTGGGTAA ACAATTTGGC
CGCGCAAATC TGCAACTCGA AGTCACCCCA ACGGTTGATG ATTGGTTTGG TGTCGATGGC
TGGCACGGGG TTAACTATGC CTTGCACCCA AGCTATAGCT TTGACAATGG CGTAAAAATC
TCAGCCTCTG TGGGTTATCA AGACCTCAGC GGTGATGGCG CCGAAGGTTG GGGCCACTGG
AACATCGGTT TGAGCAAAGC TTATTACGGC CTCAACTTCG ACCTGCGCTA CCACGGCAGT
ACTGTCGACA GTGACCATAA AGTCTATGGC ACACAGACTG AAATCTTCGA TGACAGAGTC
GTCATTGGGA TCAGTAAAAG TTTCTAA
 
Protein sequence
MMIMKTRTKF LLTGALLSLA ASSHGAEDNQ LFGGTINGNL NFASDYVFRG ESETLDGDIP 
VVQGTLSWNH NQGWYAGVFS SNIKFADPNL EIVTAPFIGK AGEFGDSGFT YDVMLFSYLY
PGASYSNYTE LWLKVGKQFG RANLQLEVTP TVDDWFGVDG WHGVNYALHP SYSFDNGVKI
SASVGYQDLS GDGAEGWGHW NIGLSKAYYG LNFDLRYHGS TVDSDHKVYG TQTEIFDDRV
VIGISKSF