| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4046 |
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| Symbol | |
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| ID | 4480260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4861408 |
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| End bp | 4862556 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728661 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_871669 |
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| Protein GI | 117922477 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAGA CAATTAAACT TGCCTCAGTA ATCAGCGTGG CGTTGTGGAT GGCAGCTTGT
AGCCCTCAAG AGGATAAGGC AGCTCAAGCA GGCGCTGGGC CGCAGAGTAT GGAAGTTGGT
GTAATCAACG TGGCGGCCAA GCCTCAGGTT ATCCAAGTCG AATTACCCGG CCGCAGCAAG
GCGTTCCTCG AAGCCGAAGT GCGTCCTCAA GTCAGCGGTA TTGTTACCAA GCGTAGCTTT
GTCGAAGGCG GTCATGTGAA GCAGGGCGAG TCCCTCTATC AAATCGATTC CGCGCCTTAC
AAGGCAGCAC TGGTGAGCGC TAACGCCGAT TTAGCCAGAG CGAATGCAAG TCTTGCTTCT
GCTAAGGCCA AAGCGGCGCG TTATCAACAA TTGGTAAAGA CTAACGCTAT CAGTAAGCAA
GATTTCGATG AAGCCGAAGC GGCTTACAAA GAAGCGCTAG CAAGCGTGAC AGTCGCTGAA
GCGGCAATCA ACACCGCCAA AATCAACCTC GAATACACCG AAGTGTTAGC GCCAATTTCT
GGCCGTATCG GTAAATCGAG TGTGACTGCG GGTGCGCTGG TCACGGCAAA CCAAAGCCAA
ACGCTGGCAA CCATTCAACA GCTTGATCCT ATCAATGTGG ATATCGCCCA ATCGAGTGCC
CAATTGCTGC GCCTAAAAGC GAAATTACAG CAAGGCAAGC TGCAAGCGGC TGATAACGCT
GACGTGCAGT TAGTGCTTGA AGACGGCACT GTTTATGGCC ACAGCGGTAA GCTGCAATTT
GCTGAGGTGA GTGTGGATGA AAACACGGGC TCAGTGATCC TGCGTGCTGA ATTCCCTAAC
CCAGATGGCC TCTTACTGCC TGGCATGTAT GTTCGCGCCG TGTTGAATAC TGGTACCGAT
CCTCAAGCTA TCTTAGTGCC ACAAAAAGCC ATTAGCCGTA ACGCTAAGGG GCAAGCCGTG
GCCATGGTGG TGAACGATCA AGGCGTAGTG GAAGCAAAAA TTGTTACTAC TGCTGAAGTT
ATCGACAATC AATGGCGTAT TACTGCCGGT TTGGAAGCGG GCGATAAGTT GATTGTGGAA
GGATTACAAA AAATCCGTCC AGGTGCACCA GTCACTCCCA AAGTTATTTC TGAAACCCAA
GCACAATAG
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| Protein sequence | MRQTIKLASV ISVALWMAAC SPQEDKAAQA GAGPQSMEVG VINVAAKPQV IQVELPGRSK
AFLEAEVRPQ VSGIVTKRSF VEGGHVKQGE SLYQIDSAPY KAALVSANAD LARANASLAS
AKAKAARYQQ LVKTNAISKQ DFDEAEAAYK EALASVTVAE AAINTAKINL EYTEVLAPIS
GRIGKSSVTA GALVTANQSQ TLATIQQLDP INVDIAQSSA QLLRLKAKLQ QGKLQAADNA
DVQLVLEDGT VYGHSGKLQF AEVSVDENTG SVILRAEFPN PDGLLLPGMY VRAVLNTGTD
PQAILVPQKA ISRNAKGQAV AMVVNDQGVV EAKIVTTAEV IDNQWRITAG LEAGDKLIVE
GLQKIRPGAP VTPKVISETQ AQ
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