| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4039 |
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| Symbol | |
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| ID | 4480253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4852980 |
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| End bp | 4853699 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728654 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_871662 |
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| Protein GI | 117922470 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAA CGCATTCTTC GCCACTTTGC CTTAAGTCGA TAGCCATAGC TAGCCTTGGT
TTGTGCTTGG CTTGGGGAAG TGTTGCGGCC GCGTTTGCCG AAGAAGCCAA GCCTAAGCCC
CGTATTGTGG CCCGTTATTC TGAAAGCGGT ATTGTGAGTA ACACTGGGCA AGAAAAAGTC
AAAGTTTATC AATATCTACA GGCCAATGGT GTCACTGCTT TTACCGATAA AGCGCCGACC
ACCAATGAGT ATCAAATCCT GCTCTATGAC TGTTTTGCCT GTCGCCCAGA TTCCAAAATT
GACTGGAATG GCATTCGGTT GTTTACCCGC AATTACGATA GTTTGATCAG CCGTGCGGCT
CATAAACATC AATTAGACCC TGCACTTATC CGCGCCGTGA TCCACGCCGA GTCGGCCTTT
AATGCCAGAG CCTTGTCGCG CACTGGCGCA ATGGGTTTGA TGCAATTGAT GCCCGAAACC
GCCAAAGAGA TGGGCGTGAC CAATGCCTTT TTACCGGAGG AGAATATTCT CGGCGGCAGT
AAGTATTTGG CGCAAATGCT AAAACAGTTT AATGGTGATA TTGCATTGGC CTGCGCGGCC
TACAATGCTG GGCCAACCAC AGTGACCCAA TACAACGGTA TTCCTCCCTA TCCAGAAACC
CAAGCCTATG TGGAACGGGT GCAAATTCTG CTAAAACGTT ACCGCAGTGC CAAAGTCTAG
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| Protein sequence | MPATHSSPLC LKSIAIASLG LCLAWGSVAA AFAEEAKPKP RIVARYSESG IVSNTGQEKV
KVYQYLQANG VTAFTDKAPT TNEYQILLYD CFACRPDSKI DWNGIRLFTR NYDSLISRAA
HKHQLDPALI RAVIHAESAF NARALSRTGA MGLMQLMPET AKEMGVTNAF LPEENILGGS
KYLAQMLKQF NGDIALACAA YNAGPTTVTQ YNGIPPYPET QAYVERVQIL LKRYRSAKV
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