| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4031 |
|---|
| Symbol | |
|---|
| ID | 4480245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4844048 |
|---|
| End bp | 4845076 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639728646 |
|---|
| Product | ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_871654 |
|---|
| Protein GI | 117922462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTAATTC GAAATTTAAG TAAAGTAGCA TTCGCGGCGC TTGCCCTGAT GCTCGCAGGC
TGTGATGGCG GCGTATTGGA TCCCAAGGGC CAGATCGGTG TCGATGAAAA GCACCTGATC
ATCATCGCTA CCCTACTCAT GCTGATTGTG GTTATCCCCG TGATCTTCAT GACTTTGTTC
TTCGCATGGA AATACCGCGA TGGCCGAGAT CATGAGGTTT TTGCCCCTAA ATGGTCCCAC
TCAAGTGCGA TTGAAACCGT GGTTTGGATT GTGCCGATTG TGATCGTCGT GATTTTAGGT
GTGATCACTT GGGGTTCAAC CCATGATCTC GACCCTTACA AACCACTCGA ACACGACGCC
AAGCCGATTA CGGTTGAAGT GGTTTCTATG GACTGGAAAT GGTTGTTTAT CTATCCAGAA
CAAGGTGTTG CATCGGTAAA TGAACTGGCT TTCCCAGCGA ATGTACCTGT GAACTTTAAG
ATCACCTCTG ATACCGCCAT GAACTCTTTC TTTATCCCGC AGTTAGGTAG CCAAATCTAC
TCAATGGCTG GGATGACGAC TAAGTTGCAC CTGATTGCCA ACGAACCCGG TACCTATGAC
GGTATTTCCG CTAACTATAG CGGCGCAGGT TTTGCGGGCA TGAAGTTTAA AGCCATTGCC
ACGCCAACGG CAGCCGACTT CGATGCTTGG GTAGCCAAGG CCAAACAACA GGCGACTAAG
ACCTTAGACT CTGCGACTTA TCAAGCCTTA GCACAGAAGA GTGAAAACAA TCCTGTTGAA
TACTTTGGCT CAGTGAGTCA CGGCATGTTC GATCAAATCG TGATGCAATA CATGCACATG
GACTCAAACG AGAACATGGC AGGCCATGAA GGCATGGAAC ACATGAGTGC CGACCACAAT
ATGGCTGGCA TGCACCACGA TATGGCGCAT ATGGCGAGCG ACCAGAAGAT GGCCGACATG
GAAGGCTCAA CCCATTCTGA CACTTCATCT ACAGAACACT CATCCACTCA CCAAGTGGAG
GCGGAGTAA
|
|---|
| Protein sequence | MLIRNLSKVA FAALALMLAG CDGGVLDPKG QIGVDEKHLI IIATLLMLIV VIPVIFMTLF
FAWKYRDGRD HEVFAPKWSH SSAIETVVWI VPIVIVVILG VITWGSTHDL DPYKPLEHDA
KPITVEVVSM DWKWLFIYPE QGVASVNELA FPANVPVNFK ITSDTAMNSF FIPQLGSQIY
SMAGMTTKLH LIANEPGTYD GISANYSGAG FAGMKFKAIA TPTAADFDAW VAKAKQQATK
TLDSATYQAL AQKSENNPVE YFGSVSHGMF DQIVMQYMHM DSNENMAGHE GMEHMSADHN
MAGMHHDMAH MASDQKMADM EGSTHSDTSS TEHSSTHQVE AE
|
|---|
| |