Gene Shewana3_4026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4026 
Symbol 
ID4480240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4835637 
End bp4837001 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content50% 
IMG OID639728641 
ProductATPase domain-containing protein 
Protein accessionYP_871649 
Protein GI117922457 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAC GTGCGCTTGC CTGGCAGTTA TTAAACTCCC TCAAAACTCG GCTCGTCCTC 
AGCGCGCTGC TGTTTATTTT GGTATTACTG CCACTGATTG GGGTCGCCCT CAATGATGCC
TTTACCGAAC AAGTAAAAAG CGCCGCCAAA AACGAGCTGA GCGCCTATGT GTATTCGGTA
TTAGCGGTGA CAGAGGTCGA AAACAAACGG ATTTTTATCC CCGAATTAGT GCTCGAAAAC
CGCTTTAACC TGATCCAATC GGGCCTCTAT GCCATTGCCA CCACAGAGAA TGCCGAGCAT
CAGCAGAACA TAGTCTGGCA TTCGCAATCC TTTATGGGCA TCACGCCGCC AGAGCATTTT
ACGATTCCTC CCACGGGCAA GAGTGCATTT GAGCAAATCG ACCTCGATGG TGCGCCGCAT
CTTATCTACA GCTTTAGCGT CAGCTTTGCC AGCCTGAACG AAAACGTGCC TGTGACTATC
CATATCATTA AGGATGAGTT GGAATTTCAA CAGCAAATTG CCCAGTTTAA TCAACAGCTT
TGGACTTGGT TGTTGATCTT AATCTTAGTC ATGCTGGTGT TTCAGTTGAG TTGGTTGATT
TGGACCATTA GGCCGCTAGC GCGCTTTACC CAAGAGCTGC ATGATGTCGA ACAGGGTAAA
TCGACCCAGC TCAGTAGCCT GTACCCGAGC GAGTTGCAGG AAGTCGCGCG GCAACTGAAT
ATCCTGCTCA ATACCGAGCA AACCCAGCGT AAACGCTATC GTAATGCCCT AGCCGATTTG
GCCCATAGCC TCAAAACACC ACTCGCTGTG ATTAAGAGCC AAGCGGATTT AAGCGAGGCG
TCGAGCGAGC AAGTGTCGAA TATCAGTCGC ATCATCAGCC ATCAGCTTAA ACGCGCCCAA
ACGGCAGCAT CGGCATCATG GCACTTAGGG ATTAAGGTGG ATGAGGTTGG TGTCAAATTG
CTGCGCACCT TAGCCAAGAT TTATCGAGAA CCGCAGATAG ATCTCAGTGG TGAAATGGCC
CCACAGGCCG TATTTAAGGG CGATGAGGCC GATCTCACCG AAATTTTAGG CAACTTGCTC
GATAATGCCT GTAAGGCTGC CAAGTCACAG GTCAAATTAA CCGTCACAGG CGACGCCTAT
CAGCTACAGC TCTGTATTGA GGACGATGGT CCTGGGATCA GCGAAGCCCT GCAAACTCAA
ATATTTGAGC GTGGGATCCG CGCCGATTCT TACCGCCAAG GCAACGGCAT TGGTCTAGCG
ATTGTCCGCG ATTTAGTGGA TAGCTATAAC GGCCGCATTT CCGTATCCCG TTCAGAAAAC
TTAGGCGGCG CCAAGTTTAC CGTTAACTTC ACTCACTCGG CTTAA
 
Protein sequence
MSKRALAWQL LNSLKTRLVL SALLFILVLL PLIGVALNDA FTEQVKSAAK NELSAYVYSV 
LAVTEVENKR IFIPELVLEN RFNLIQSGLY AIATTENAEH QQNIVWHSQS FMGITPPEHF
TIPPTGKSAF EQIDLDGAPH LIYSFSVSFA SLNENVPVTI HIIKDELEFQ QQIAQFNQQL
WTWLLILILV MLVFQLSWLI WTIRPLARFT QELHDVEQGK STQLSSLYPS ELQEVARQLN
ILLNTEQTQR KRYRNALADL AHSLKTPLAV IKSQADLSEA SSEQVSNISR IISHQLKRAQ
TAASASWHLG IKVDEVGVKL LRTLAKIYRE PQIDLSGEMA PQAVFKGDEA DLTEILGNLL
DNACKAAKSQ VKLTVTGDAY QLQLCIEDDG PGISEALQTQ IFERGIRADS YRQGNGIGLA
IVRDLVDSYN GRISVSRSEN LGGAKFTVNF THSA