Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4014 |
Symbol | |
ID | 4480228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4819929 |
End bp | 4820432 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639728629 |
Product | transcription elongation factor GreB |
Protein accession | YP_871637 |
Protein GI | 117922445 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCGC ATTTGATCAC CCGCCAAGGC TGGATGACCT TAGATAAAGA ATTAAAGTAC CTGTGGAAGG AATATCGTCC GCAGATCACC CTTAAAGTGC AAGAGGCAGC CGCCCAGGGC GATAGAAGTG AAAACGCGGA TTACACTTAC AATAAAAGAC TTCTACGTCA AATAGATAGT CGGGTTAGAT ATCTGGTCAA ACGCCTCGAA GAACTTAAAA TCGTCGACTA TTCTCCCCAG CAGGAAGGCA AAATTTACTT TGGCGCTTGG TTCGAGCTCG AAAACGAAGC GGGCGAGTGC GTGCGTTATC GTATCGTCGG TAAGGATGAG CTCGACACTA AACTCGGCTA TATCACCATA GATTCTCCCA TGGCGCGGGC ACTGATCGGC AAACAGGTCG ATGATGAAGT GGTCGTGCAA ACCCCTTCGG GTCCGAAGGA ATGGTATATC AATGACATCC GCTATACCCC ATTCGAGACG CCGCTCGAGG GCGAGCCAGA ATAA
|
Protein sequence | MKAHLITRQG WMTLDKELKY LWKEYRPQIT LKVQEAAAQG DRSENADYTY NKRLLRQIDS RVRYLVKRLE ELKIVDYSPQ QEGKIYFGAW FELENEAGEC VRYRIVGKDE LDTKLGYITI DSPMARALIG KQVDDEVVVQ TPSGPKEWYI NDIRYTPFET PLEGEPE
|
| |