| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4013 |
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| Symbol | |
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| ID | 4480227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4817460 |
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| End bp | 4819799 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728628 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_871636 |
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| Protein GI | 117922444 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTA TTGCCCAAAT TATTGCTCAG GAACTGAATG TTCAGGAGCA TCAAGTCACT
GCCACCATAG ATTTGCTCGA CAATGGTGCC ACAGTTCCCT TCGTCGCCCG TTACCGTAAA
GAAGCGACCG GTGGTTTAGA TGACACCCAA TTACGTACAC TGCACACCCG TTTAGGCTAT
TTACGTGAGC TGAATGACAG ACGTCAGGTC ATTTTATCCA GCATTCAAAC TCAGGGTAAG
TTAACGCCTG AATTACAAAG GGAAATCGAA GGTGCCGACA GTAAGACTCG CCTCGAGGAT
CTGTATCTTC CCTTCAAGCC TAAGCGCCGC ACTAAGGGCC AAATTGCGAT TGAAGCGGGT
TTAGAACCGC TTGTTGAAGC TGTGCTTGCC GATCGCAAGG CGGATATTGA AGCATTGGCC
GCGGGTTATC TAAATCTCGA AGCGGGTTTT GCCGATACCA AAGCCGTGCT GGAAGGCGCC
CGTTATATTC TGATGGAGCG TTACGCCGAA GATGCGGAAT TACTGCGTAA AGTTCGTGAC
CACCTAAGTC AAAACAGTGT GTTAGAAAGC CGCGTTATCG CAGGCAAAGA GAAGGAAGGC
GCGAAGTTTC GCGACTATTT CGAGCACAAT GAACCTCTGG CGAAAGTGCC GTCACACCGC
GCCTTGGCGA TGTTGCGTGG CCGCAATGAG GGCTTCCTCT CCTTATCAAT GAATGCCGAT
CCTGCAGCCG AAGCGGGTCA GGGCAGTTAC TGCGAAGTCA TTATTAGCGA ACACTTAGGC
CTGAAACTTG GCGAGAGCAG TGTTGACCAA TGGCTTAAGA CCGTCGTGAC CGCCACATGG
CGGATTAAAA TTGCTCTGCA GATGGAAACC GAGTTTATCT CGCAAATGCG TGAGCGCGCC
GAAGCGGAAG CCATTAAGGT GTTTGCCCGT AACTTAGGCG ACTTGTTAAT GGCCGCACCA
GCGGGTGCCA AAGCCACCAT GGGGCTAGAC CCTGGTCTAC GCACGGGCGT TAAAGTGGCT
ATAGTGGATA ACACGGGTAA GTTAGTGGCA CACACGACTA TCTTCCCACA TGCGCCGCAG
AATTTGTGGG ACAAGTCGAT TCGCACCCTC GCCAACCTAG CGCAAATGCA TAAGGTAGAA
TTAATCGCGA TTGGTAACGG CACTGCATCA CGCGAAACTG ACAAGTTAGC GGGTGAGTTG
ATTGCCAGCC TTAAGGACAG CCAACCGCAA CTGACCAAGG TGATGGTGAG TGAAGCGGGT
GCGTCCGTGT ATTCCGCCTC TGAACTCGCC GCACTGGAGT TCCCTGAGTT GGACGTGTCT
ATCCGTGGCG CCGTTTCGAT TGCTCGCCGT TTACAGGATC CCTTAGCGGA ACTGGTGAAG
ATTGAGCCAA AATCCATCGG TGTGGGTCAA TACCAGCACG ATGTGAGTCA AAGCCAGCTG
TCTAGCTCGC TCGAAGCCGT GGTCGAAGAC TGCGTAAACG GTGTGGGCGT GGATTTAAAC
ATGGCATCGG TGCCTTTGCT GTCGCAAGTT GCAGGGTTAA ACAAGACCTT AGCGAAAAAC
GTGGTCGACT ACCGCGATGC CAATGGCGCC TTCAAAAACC GTAAAGAACT GCTGAAAGTG
CCACGCTTAG GCCCTAAAGC CTTTGAACAA GCCGCGGGCT TTTTGCGGAT CCGTGATGGC
GACAATCCCT TAGATATGTC GGCGGTTCAC CCCGAAGCCT ATGCACTGGT CGAAACTATC
GCTAAGACCA AGCAAGTGGA GCTGGCGAGT CTTATCGGTA ATTCTGAGCT GCTACGTAAT
ATCAAGCCGC AGGAGTTTAC GACCCCTGAG TTTGGTTTAC CGACAGTGAC CGACATCCTA
AGCGAGCTGG ATAAACCGGG CCGTGACCCC CGTGGTGAGT TTAAAACCGC CAAATTTAAG
GATGGGGTTG AGGAGCTTAA GGATCTGAAA CCTGAGATGA TCCTCGAAGG TGTTGTCACT
AACGTGACTA ACTTTGGTGC CTTTGTGGAT ATCGGCGTGC ATCAAGATGG TTTAGTGCAT
ATCTCGTCAT TAACCGACAA GTTTATTACC GATCCCCATA CCGTGGTGAA AGCGGGTGAT
GTCGTGAAAG TGAAGGTGAT GGAGGTCGAT GTCGAGCGTC GTCGTATTGG CTTGAGTATG
CGTCTGGACG AGGCTATCGA TCAGAGCAAG AGTCAATCAC GCGGTCCATC TCAAGGTAAG
CCACAGGCTC ATAAGGGCAA TGCACAGCAT AAATCTGCAC GTCCCGCGCC AAAAGCTGCA
CCTGTCAACG CGGCTATGGG CAATGCCTTT GCCGACGCCT TCGCTAAGCT GAAAAAGTAA
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| Protein sequence | MQTIAQIIAQ ELNVQEHQVT ATIDLLDNGA TVPFVARYRK EATGGLDDTQ LRTLHTRLGY
LRELNDRRQV ILSSIQTQGK LTPELQREIE GADSKTRLED LYLPFKPKRR TKGQIAIEAG
LEPLVEAVLA DRKADIEALA AGYLNLEAGF ADTKAVLEGA RYILMERYAE DAELLRKVRD
HLSQNSVLES RVIAGKEKEG AKFRDYFEHN EPLAKVPSHR ALAMLRGRNE GFLSLSMNAD
PAAEAGQGSY CEVIISEHLG LKLGESSVDQ WLKTVVTATW RIKIALQMET EFISQMRERA
EAEAIKVFAR NLGDLLMAAP AGAKATMGLD PGLRTGVKVA IVDNTGKLVA HTTIFPHAPQ
NLWDKSIRTL ANLAQMHKVE LIAIGNGTAS RETDKLAGEL IASLKDSQPQ LTKVMVSEAG
ASVYSASELA ALEFPELDVS IRGAVSIARR LQDPLAELVK IEPKSIGVGQ YQHDVSQSQL
SSSLEAVVED CVNGVGVDLN MASVPLLSQV AGLNKTLAKN VVDYRDANGA FKNRKELLKV
PRLGPKAFEQ AAGFLRIRDG DNPLDMSAVH PEAYALVETI AKTKQVELAS LIGNSELLRN
IKPQEFTTPE FGLPTVTDIL SELDKPGRDP RGEFKTAKFK DGVEELKDLK PEMILEGVVT
NVTNFGAFVD IGVHQDGLVH ISSLTDKFIT DPHTVVKAGD VVKVKVMEVD VERRRIGLSM
RLDEAIDQSK SQSRGPSQGK PQAHKGNAQH KSARPAPKAA PVNAAMGNAF ADAFAKLKK
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