| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4009 |
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| Symbol | |
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| ID | 4480223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4812987 |
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| End bp | 4813775 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728624 |
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| Product | competence protein ComF |
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| Protein accession | YP_871632 |
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| Protein GI | 117922440 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGCG ATAGCAAATG GACTTGGTCG CAACAGGGGG CGAAGCTGTT ACGCATAGTT
TCGCATTTGG GGCAGCGTTA CTTGGCGGGC AGTTTACCTA ACCGCTGCTT ACTGTGCCAC
CAATCCCTCA ATGCAAAGGA AGCGGGATTT TGTCAGGTAT GTCTACAAAC GGGTTTGTAT
CAAAGCCCAA TTTGCTTAGG TTGTGGCAAA TCCATGTCAC TTGAACTCGA ATATTGCGGA
GAGTGCCAAC GGCATCAACC GCGAAAAGTC ATCGCACCTT GCAGTTATCA TCAAGGTTTT
GGCCCTTGGA TAGCGGCCAT TAAATATCAG GGGCAACTCG CCGCCTTACC CATTCTGTGC
CAAGCCTTAG TGGCGCGCAT TGGTCAGCTT GAACAGCAAG GATTCATCAC GCTACCGCAG
GCCATAGTGC CAGTCCCTTT ACACCCGAAT CGGCTGCGCC AACGTGGATT TAATCAGGCT
TGGCTCATCG CCCATGAATT ATCGAAGCAG CTCTCGCTGC CACTGGCCTG TGACGGATTA
ATTCGGCGGC AGGATACCCG CCCACAAGCC GGACTCAATG GCACACAGCG ACGACGAAAT
CTACAGGATG CTTTTGAGTT AAATGCAGAT TTTGCTTATC AACGGATTGC GCTGGTGGAC
GATGTGGTGA CGACTGGCAC AACAGTGGCA GAAATTGCCC GTTTGTTCGA GGCGCGATAT
ATACAGGTGC AAATATGGTG TCTCGCCAGA GCGGAAGCAC CGGGGTTGTT GGAAGCGTTC
GAGGAGTAG
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| Protein sequence | MSGDSKWTWS QQGAKLLRIV SHLGQRYLAG SLPNRCLLCH QSLNAKEAGF CQVCLQTGLY
QSPICLGCGK SMSLELEYCG ECQRHQPRKV IAPCSYHQGF GPWIAAIKYQ GQLAALPILC
QALVARIGQL EQQGFITLPQ AIVPVPLHPN RLRQRGFNQA WLIAHELSKQ LSLPLACDGL
IRRQDTRPQA GLNGTQRRRN LQDAFELNAD FAYQRIALVD DVVTTGTTVA EIARLFEARY
IQVQIWCLAR AEAPGLLEAF EE
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