| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4004 |
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| Symbol | |
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| ID | 4480218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4807374 |
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| End bp | 4809122 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639728619 |
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| Product | flavocytochrome c |
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| Protein accession | YP_871627 |
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| Protein GI | 117922435 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATA AACAATCCAT CATAGGTCTT GCTATTACTG CACTCATTGT GGCTGCGGGC
TGTCAAGTGA CACATCAAAT AGTCAAAAGC CAAGGTACGG CTCAGGGTAA ACATGGCGAG
GTGCAGGTTG AAACGACATT TGAAGACGGG CATATCGTTG CGATTGATGT ACTCAAGCAA
AAGGAAAATA AAGTTCTTGC GGGAGCAGTA TTTCGTGATG TGAAGCAAGC GATTATTGAT
AACAACTCTG TTGATGTTGA CGGTATTACT GGGGCGACAG TGACTTCAAA TGCACTTAAA
GAAGCCGTCA GTAAAAGTAT TGAAGCCGCT GGCGTCACAT TGGCTGCCGT TGCTGCCGCG
AAAAAAACGG AAGCTGTAAC ACCGACTGAA TATACCTACG ACGTAGTTGT GATTGGTTCG
GGTGGGGCTG GCTTTAGTGC AGGTTTAGAG GCTATGGCGG CTGGTCGAAC GGCTGTTATT
ATTGAAAAAA TGCCGATCGT TGGTGGTAAC TCATTGATTT CAGGCGCTGA GATGAATGTG
GCCGGGAGCT GGGTACAAAA AAACATGGGT ATAACTGATA GCAAAGAGCT ATTTATCAGC
GATACCTTAA AAGGTGGGGA TTTTAAGGGT GACCCTGAAA TGGTTAAGAC CATGGCGGAC
AATGCTGTCG AGGCCGCAGA GTGGTTAAGG GATTATGTAA AAGTTGAGTT TTATCCCGAT
CAATTATTCC AGTTTGGTGG GCATAGCGTT AAGCGGGCTT TAATCCCTAA AGGCCACACC
GGCGCTGAAG TGATCAGCAA GTTTTCTATC AAGGCTGAAG AAGTCGGTTT GCCTATTCAC
ACCAACACCA AAGCGGAGCG ATTACTTCAA GATCAAACGG GGCGGGTTGT TGGCGTCGAG
GCGACTCACA ATGGTAAAAC CATCACTTAT CATGCTAAAC GCGGTGTGAT TGTTGCCACT
GGTGGCTTCT CATCAAATAT GGAAATGCGT AAGAAATACA ACCCTGAGTT AGATGAGCGT
TACGGCAGTA CGGGACATTC AGGTGGTACT GGTGATGGGA TTGTTATGGC GGAGCAGATT
CACGCCGCGG CTAAAAATAT GGGCTATATC CAGTCATATC CTATCTGTAG CCCAACCTCA
GGTGCGATTG CTTTAATTGC TGATGCGCGT TTTTTCGGAG CTGTGCTAAT TAACCAGAAG
GGTGAGCGTT TTGTGGAAGA ATTAGAGCGT CGTGACGTGA TTTCACAAGC TATTCTGGGC
CAACCTGGTC GTTATACCTA TGTGTTGTGG AATCAGGCTA TTGAGGACGT TGCCCATACG
GTTGAAATGC ACCAAGGCGA ACTTAAAGAA TTTACCAAAG ATGGGCTAAT GCACAAGGTT
GACACCCTAG AAGAAGCGGC CAAAGTCTTT AATATTCCTG AAGAGAAGCT ATTAGCAACG
ATTAAAGACG TTAATCACTA TGCCGCAACT GGCAAGGATG AAGCCTTTAA TCATCGCTCT
GGTTTAGTCG ATTTAAGCAA AGGACCATAT TGGATTTTAA AAGCGACCCC TTCAGTACAT
CACACTATGG GTGGCTTAGT GGTTGATACT CAGACTCGAG TGCTAGATGA AAAAGGAAAT
ATTATTCCTG GCTTATTTGC CGCAGGTGAA GTGACAGGCT TAACCCACGG TACAAACCGA
CTGGGTGGAA ATGCGTACAC AGATATTATT GTGTTTGGTC GAATTGCAGG CCAAGAAGCC
GCTAAGTAG
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| Protein sequence | MHYKQSIIGL AITALIVAAG CQVTHQIVKS QGTAQGKHGE VQVETTFEDG HIVAIDVLKQ
KENKVLAGAV FRDVKQAIID NNSVDVDGIT GATVTSNALK EAVSKSIEAA GVTLAAVAAA
KKTEAVTPTE YTYDVVVIGS GGAGFSAGLE AMAAGRTAVI IEKMPIVGGN SLISGAEMNV
AGSWVQKNMG ITDSKELFIS DTLKGGDFKG DPEMVKTMAD NAVEAAEWLR DYVKVEFYPD
QLFQFGGHSV KRALIPKGHT GAEVISKFSI KAEEVGLPIH TNTKAERLLQ DQTGRVVGVE
ATHNGKTITY HAKRGVIVAT GGFSSNMEMR KKYNPELDER YGSTGHSGGT GDGIVMAEQI
HAAAKNMGYI QSYPICSPTS GAIALIADAR FFGAVLINQK GERFVEELER RDVISQAILG
QPGRYTYVLW NQAIEDVAHT VEMHQGELKE FTKDGLMHKV DTLEEAAKVF NIPEEKLLAT
IKDVNHYAAT GKDEAFNHRS GLVDLSKGPY WILKATPSVH HTMGGLVVDT QTRVLDEKGN
IIPGLFAAGE VTGLTHGTNR LGGNAYTDII VFGRIAGQEA AK
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