Gene Shewana3_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3977 
Symbol 
ID4480191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4775504 
End bp4776067 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID639728593 
ProductNapC/NirT cytochrome c domain-containing protein 
Protein accessionYP_871601 
Protein GI117922409 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC GTGCACTATT TAAACCAAGC GCAAAATATT CCATCCTGGC GCTGATCGTC 
GTCGGTATTG TTATCGGTGT TGTCGGCTAT TTTGCAACCC AACAAACCTT ACATGCGACA
AGCGAAGACG CATTCTGTAT GAGCTGCCAT AGCAACCACT CATTGAAAGA TGAAGTGTTA
GCTTCTGCCC ACGGCGGTGG TCGTGCGGGT GTGACAGTAC AGTGTCAAGA CTGCCACTTA
CCACACGGTC CAGTGGATTA CTTGATTAAG AAAATCATCG TATCTAAAGA CTTATACGGT
TTCTTAACGA TCGATGGCTT TAACACTCAA GCTTGGTTAG ACGAAAACCG CAAAGAGCAA
GCAGACAAAG CATTGGCTTA CTTCCGTGGT AATGACTCTG CAAACTGCCA ACACTGCCAT
ACTCGTATTT ACGAGAACCA GCCAGACACT ATGAAGCCAA TGGCTGTGAG AATGCACAGC
AACAACTTCA AGAAAGATCC TGAAGCGAGA AAGACCTGTG TGGATTGTCA CAAAGGTGTC
GCTCACCCCT ATCCAAAAGG ATAA
 
Protein sequence
MNWRALFKPS AKYSILALIV VGIVIGVVGY FATQQTLHAT SEDAFCMSCH SNHSLKDEVL 
ASAHGGGRAG VTVQCQDCHL PHGPVDYLIK KIIVSKDLYG FLTIDGFNTQ AWLDENRKEQ
ADKALAYFRG NDSANCQHCH TRIYENQPDT MKPMAVRMHS NNFKKDPEAR KTCVDCHKGV
AHPYPKG